Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5890 |
Symbol | |
ID | 8729668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7132157 |
End bp | 7133518 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Fmu (Sun) domain protein |
Protein accession | YP_003390652 |
Protein GI | 284040722 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.133324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00389453 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGACGC AGTTGGGAGC AGAGTTTGCC AAATTTGAGT CCGCACTGGT GGAGCCAACC CCGGTGAGTA TCCGCATTAA TGCCCGAAAA TTGGGTGGGG CCGCTTATGA TCCCACCGAT CTGGTGCCTG TTCCCTGGTG TCCCGATGGC TATTACCTGC CCGAACGCCC CAGTTTCACG CTTGATCCGT TGTTTCAGGC TGGTGCTTAT TATGTGCAGG AGGCTTCGTC GATGTTGTTG CACGAAGCCC TCCGGCAAAC GGTCAATCTC GACCGGCCGC TAAGGGTACT AGACCTATGC GCGGCTCCGG GTGGGAAAAG TACGTTGCTG GCGTCGGCCC TGCACCCCGA TAGCCTATTG GTATGTAATG AAGTGATACG TAGCCGGGTG TCGGTCCTGC GCGAGAATCT GGATAAATGG GGTTACCCAA ATGTGGTGGT CAGCAACCAC GACCCGGAAG ACATGAGCAA GCTGACGGGT TTTTTCGATG TTGTGCTGGT CGATGCACCC TGCTCGGGCG AAGGCCTGTT TCGAAAAGAT CCCGACGCTA TGCAGGAGTG GTCGGAAGCG AGTGTTGATC TGTGCTCAGC CCGGCAGAAA CGGATTCTGG CCGCAGCTGC ACCTTTACTC GATAAAGACG GTATTCTGAT CTATAGCACC TGTACATATA ATGATAGAGA GAACGCCGAA AACGTTCGAT ATCTGACCGA AATCGGGTTT CGTAATAAGC CGCTTATTCT GCCATCGGAA TGGAATATTG TGGAGCGACA GGCGGGCGAT CCGGAAACGG GTGAGGCCGT CGGGTATCAA TGCTACCCGC AGCGGGTTCG GGGCGAAGGC TTTTTTATCA GTGCCTTTAA AAAAACGGGC TTTACGGCTC CGGTAAAACT CGATGCCCGA ACGTTTCGGA CCATTCGTGC CCTTCGACCC CGCGAAACGG CTTCAGCGGC CAAGTGGCTT CAGAATCCAG CCGATTTTTC GTTCTGGGAG AAACCCAATG GCGATGTGAT GGCCCTGCCT AAAGCACTCG AAAAAACGTA CCTATTTCTC GACAGTGCTT TAAAGAGTAA AGGCTTTGGG TTAGAGATGG GGCAGTTTAA AGGAACGGAC TTTGTACCCT CGCACGCGCT GGCGCTGAGT ACGGCGGTTA ACCAAGACCT GCCGGGGCTC GAATTGAGTA AGGAAGACGC CCTGCGCTAC TTTAAGAAAG AGAATCTAGT ATTTGATGAA CCCGTAAAAG GCTGGCTACT CGCCAAATAT AAAGGGGTAA ATCTGGGTTG GGTAAAAGGA GTAGGTACTC GCGTTAATAA CTATCTTCCG AAAGACTGGC GAATCAGAAT GGATATAAAG GAGTACGTAT GA
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Protein sequence | MQTQLGAEFA KFESALVEPT PVSIRINARK LGGAAYDPTD LVPVPWCPDG YYLPERPSFT LDPLFQAGAY YVQEASSMLL HEALRQTVNL DRPLRVLDLC AAPGGKSTLL ASALHPDSLL VCNEVIRSRV SVLRENLDKW GYPNVVVSNH DPEDMSKLTG FFDVVLVDAP CSGEGLFRKD PDAMQEWSEA SVDLCSARQK RILAAAAPLL DKDGILIYST CTYNDRENAE NVRYLTEIGF RNKPLILPSE WNIVERQAGD PETGEAVGYQ CYPQRVRGEG FFISAFKKTG FTAPVKLDAR TFRTIRALRP RETASAAKWL QNPADFSFWE KPNGDVMALP KALEKTYLFL DSALKSKGFG LEMGQFKGTD FVPSHALALS TAVNQDLPGL ELSKEDALRY FKKENLVFDE PVKGWLLAKY KGVNLGWVKG VGTRVNNYLP KDWRIRMDIK EYV
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