| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5859 |
|---|
| Symbol | |
|---|
| ID | 8729634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 7100675 |
|---|
| End bp | 7102378 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003390622 |
|---|
| Protein GI | 284040692 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCG AGTCAACACT AAATCCATAT CCCTGGCGCC GTTTCTACCC CAAAGAGGTG
CCGGACGAGA TAAACCCGGA TGCTTATCCA TCGCTGGCAG CTTTGATGGA AGAGGGTTTT
CGACAATTCA CGGACCGGCC TGCTTATTCC TGCATGGGAA AAGAAATCAC CTTTGGTGAG
GTCGACAAGC TTTCAGCGCA GTTTGCCTCC TTTTTGCAAA ACGAACTGAA ACTTCAGAAA
GGGGATCGCA TAGCGATTCA GATGCCTAAC ACGCTGCAGT ATCCGGTGGC TATGTTTGGC
GCCTTGCGCG CGGGTTTGGC CGTTGTGAAC ACAAACCCGC TGTACACACC ACGTGAGATG
CAGCATCAGT TCAAGGACTC CGGGGCAAAA GCCATCGTGA TCCTGGCCAA CTTTGCCAGC
AATCTGGAGA AAATTCTAGA TCGAACGGAC ATACAGCATG TCATTGTCAC CTCGCTCGGT
GATTTACTGG GTTTCCCCAA AAAGCAGATC GTCAATGCGG TTGTTAAGTA TGTGAAAAAG
CTGGTTCCGG CTTACAACCT TCCCAACTCG ATTTCGTTCA ATGATGCCCT GAGCCGGGGC
AGCAGCCAGC CTTTCAAACC CGTAGCCATC AAGAATACGG ACATGGCTTT CGTTCAATAT
ACGGGCGGCA CCACGGGCGT TTCGAAGGGC GCTGTACTGA CGCACCGCAA CATCCTGTCC
AATGTTGAAG GCCAGGATTA CTGGATGAAG CCGGGTGGCA TTCCCGATGG AGAAGGCATT
ATCGTAGCGG CTTTGCCACT CTACCACGTG TATGCACTTA CGACCAACGC ACTGGCGGCA
TTGAAAAGCG GGTCTATGAA CCTGATGATT ACTAATCCGC GCGACATGAA CGCCTTTATC
GACGATCTGA AAAAATACAA GATCACTGCT TTTACGGGCG TCAACACGCT TTATAATGGC
CTGTTGAATA ACCCCCGAAT TGGCGAAGTT GACTTCAGTC ACCTTAAAAT CACATCGGCG
GGTGGTATGG CCCTGCAAAC ATCCGTTGCC GAACGATGGG CGAAACTGAC CGGAAATACC
CCCTGCGAAG GCTACGGCCT GACGGAGACA TCGCCGGTAC TTTGTTCCAA CCCTACCGAT
GGCAATGCAC GGGTAGGCAC GATTGGCATC CCCTGGCCGA GTACAGAAAT GAAGATCATC
CGCGACGATG GCAGCGATGC CCCCGTTGGC GAACCCGGCG AAATTGTAGC TCGTGGTCCG
CAGGTGTTCA GCGGGTATTA CAACCGGCCC GAAGAAACCG CCAAATCCAT GCTGGGTGAC
TGGTTTAAAA CCGGCGATGT GGGTGTTATG AATGAGGAAG GCTTCTTTAA GATTGTCGAC
CGCAAGAAAG ACATGATCCT GGTGTCCGGC TTTAACGTTT ACCCGAATGA GATAGAAGAT
GTGGTGGCCC AGTGTCCGGG TGTGCTCGAA GTGGCGTGTA TTGGCGTTCC CGACGAGAAA
TCGACGGAGG TTGTCAAAAT CTTTGTTGTA AAGAAAGACC CGGCGCTTGA GGCTGACACG
ATCAAGGCAT TTTGCCGTGA GAACCTGACA CCCTATAAAG TACCCCGCAT TATTGAGTTC
AGAACGGAAT TACCCAAGTC GAACGTTGGC AAAATCCTTC GCAAACCTCT ACGAGATGAA
GAGTTAGCCA AATTAAAAAA GTAG
|
|---|
| Protein sequence | MNTESTLNPY PWRRFYPKEV PDEINPDAYP SLAALMEEGF RQFTDRPAYS CMGKEITFGE
VDKLSAQFAS FLQNELKLQK GDRIAIQMPN TLQYPVAMFG ALRAGLAVVN TNPLYTPREM
QHQFKDSGAK AIVILANFAS NLEKILDRTD IQHVIVTSLG DLLGFPKKQI VNAVVKYVKK
LVPAYNLPNS ISFNDALSRG SSQPFKPVAI KNTDMAFVQY TGGTTGVSKG AVLTHRNILS
NVEGQDYWMK PGGIPDGEGI IVAALPLYHV YALTTNALAA LKSGSMNLMI TNPRDMNAFI
DDLKKYKITA FTGVNTLYNG LLNNPRIGEV DFSHLKITSA GGMALQTSVA ERWAKLTGNT
PCEGYGLTET SPVLCSNPTD GNARVGTIGI PWPSTEMKII RDDGSDAPVG EPGEIVARGP
QVFSGYYNRP EETAKSMLGD WFKTGDVGVM NEEGFFKIVD RKKDMILVSG FNVYPNEIED
VVAQCPGVLE VACIGVPDEK STEVVKIFVV KKDPALEADT IKAFCRENLT PYKVPRIIEF
RTELPKSNVG KILRKPLRDE ELAKLKK
|
|---|
| |