Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5838 |
Symbol | |
ID | 8729613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7077888 |
End bp | 7078763 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003390602 |
Protein GI | 284040672 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.794515 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGACA ACGAATTGAA AGCCCTTATC TCGCTTCTGG ACGACGAAGA CCGGGAAGTC GTTGAACACG TTGAACAACA AATTCGACAG ATGGGGGGGC AAATGATACC ATTTTTGGAG TCAGAATGGG AAGGTAGCTT CAATCCTGCC CTTCAAAAAC GAATAGAAGA AATTATACAC GATCTCCAAT ATGAGTCTGT ATTGGATCGT ATGCGCGACT GGAAAAATGG CGGAGGTATG GATTTGCTGG AAGGACTCTG GATCATTGCC ACCTATCAGT ATCCTGACTT GTCGCTCGAT AAACTCAAGC AGGAGGTAGA GCAACTTTTC TATGATGTAT GGGTTGATTT CAAGGCAGAT ATGCACCCCG ACGAGCAGAT CAAGGCCATG AATAGTGCTT TTTTTTCGAA GCTAAAATTT GCGCCGAACA CCAAGCATTT TCACTCGCCG GCCAATTCCA TGATCAACCA GGTACTCGAA TCGCGCCGGG GAAACCCCAT AACGCTTTGT GTACTTTATA TGCTTATTGC CAAACGGCTC AATCTGCCTG TATACGGTGT GAATCTGCCC AATCTCTTCG TGCTGACCTA TAAAAACAGC AGTGGCGTTC AATTTTATAT CAATGTATTT AACCGGGGTC TGGTCTTTAC CACCAAAGAC ATCGATCAGT ACATTGATCA GTTAAACATC AAACGGCTGG ATACTTTTTA CCAGCCATGC ACAAACGCCG ATATTGTCCG GCGTGTACTA CGCAATCTGA CGCTGGCTTT TGAGAAAAAT GGCGATGCCG AACGTGTTCG GGAAGTAGAG CAGATACTCA ATACCGTTCG GGACGACGGC GATGGCCTCC CTTTGTCCGA TTATACACAA CGGTAA
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Protein sequence | MNDNELKALI SLLDDEDREV VEHVEQQIRQ MGGQMIPFLE SEWEGSFNPA LQKRIEEIIH DLQYESVLDR MRDWKNGGGM DLLEGLWIIA TYQYPDLSLD KLKQEVEQLF YDVWVDFKAD MHPDEQIKAM NSAFFSKLKF APNTKHFHSP ANSMINQVLE SRRGNPITLC VLYMLIAKRL NLPVYGVNLP NLFVLTYKNS SGVQFYINVF NRGLVFTTKD IDQYIDQLNI KRLDTFYQPC TNADIVRRVL RNLTLAFEKN GDAERVREVE QILNTVRDDG DGLPLSDYTQ R
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