Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5792 |
Symbol | |
ID | 8729567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7028958 |
End bp | 7030334 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | peptidase M16 domain protein |
Protein accession | YP_003390556 |
Protein GI | 284040626 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.047663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATACA TACTTACCTT ATTTAGTACG CTCGTTATAA CGGGAGCGTC GTGGGCGCAG ACGTTTAAAG TGCCGCCCTA TCAAAAATTC AAGCTGAAGA ACGGCCTGAC GGTCTATTTG ATGGAACAGC ACGAGGTGCC GCTCATCAAT GTATCGGCGG TATTCGATGC GGGTGCGGTG CAGGATGGAA ACCGGTATGG ACTGGCCAAC ATGACGGCCG ATGCGCTGCT GTTTGGGAGT TCGAAGTACA CGAAGGCGCA GCTGGAAGAG AAAACCGAAT ACGTTGGCGC AAGTGTAGAC ACATACGCTG GGAAGGAAGT AGCCAAACTG AGTGCGTCCT TTGCCGTAAA AGATCAGGAC TTACTGTTCG ATATTATTCA GGACGTACTA ACGAAGCCCA CCTTCGATCA GGGCGAGTTC GATAAATACA GACAACGCCA ACTGCTACAG TTGACCCAAC AGAAAGAAAG TCCGAGGGGC GTGGTGGGGT CGTACTTTAA CAAATTCGTG TTTGAGGGCC ACCCATACGC CAATCCGCTA ACCGGCACGC CTAATTCGGT ATCGGCCATA TCGGCAAATG ATGTTCGGCA GTTTTACCAG AAAAACTTCA CCACCGATCG GGCGGCCATT GCCATCGTGG GCGATTTCAA CACAGCGGCC ATGAAAAAGC GCATTACCGA CCTGTTTGGC AGTTGGAAAA CGGCACTCGC CACATCCCCT GCGTTGACCG ACCCAACCGT TGCCTTCGAT AAAAGCCGCG TCCTGCTCGT CAATAAAGAT GATGCTCGTG AAACAACGTT CCTGATAGGC GGTAAAGGTA TCACACAGAA TAACCCCGAT TTTATACCCG TCACCGTTGT CAACACCATT CTGGGTGGTC GGTTTACGTC CTGGCTGAAC GATGCCCTGC GCGTAAATTC CGGTTTGACC TATGGGGCCA GCAGCCGTTT CGGTACTTTC CGGAAAAGTG GCACCTTTGC TATTTCGACG TTTACAAAAG TCAGTACTAC CACGCAGGCA ATCGATATGG CCTTGCAGGT GCTCGACAGT CTGCACCGGA CGAGTATTGA CGAGAAAACG CTTTCGTCGG CTAAAAACTA CGTAAAAGCC GACTTCCCAC CGAGGTATGA GTCGGCTGCT GAACTAGCCA ATTTGTTGAC GGATATGTTT AGCCTGGGCT TTGATGAATC GTTCATTAAC AATTTTCAGA AAAACGTCGA TGGACTTACA GTGGCTAAAA CCCGCCAGAT TATCGACCAG TATTTTCCGA AAGACAAGCT TCAGTTCGTG CTGATTGGCA AAGCGGAAAC CATTCGGGAC AAGGTGAAGA AATACGGAAC CATCACCGAA AAAGAAATTA AAGCCGAAGG GTTTTAA
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Protein sequence | MKYILTLFST LVITGASWAQ TFKVPPYQKF KLKNGLTVYL MEQHEVPLIN VSAVFDAGAV QDGNRYGLAN MTADALLFGS SKYTKAQLEE KTEYVGASVD TYAGKEVAKL SASFAVKDQD LLFDIIQDVL TKPTFDQGEF DKYRQRQLLQ LTQQKESPRG VVGSYFNKFV FEGHPYANPL TGTPNSVSAI SANDVRQFYQ KNFTTDRAAI AIVGDFNTAA MKKRITDLFG SWKTALATSP ALTDPTVAFD KSRVLLVNKD DARETTFLIG GKGITQNNPD FIPVTVVNTI LGGRFTSWLN DALRVNSGLT YGASSRFGTF RKSGTFAIST FTKVSTTTQA IDMALQVLDS LHRTSIDEKT LSSAKNYVKA DFPPRYESAA ELANLLTDMF SLGFDESFIN NFQKNVDGLT VAKTRQIIDQ YFPKDKLQFV LIGKAETIRD KVKKYGTITE KEIKAEGF
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