Gene Slin_5756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5756 
Symbol 
ID8729531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7001975 
End bp7003141 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content50% 
IMG OID 
ProductPropeptide PepSY amd peptidase M4 
Protein accessionYP_003390520 
Protein GI284040590 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCGA AAAAACTGAT TGGTAAAGTA CACCTCTGGC TCGGACTCTC GTCCGGGCTA 
TTGGTGTTTG TGGTTGCCAT TACGGGCTGT GTATTAGCAT TTGAGCAGGA GATCAAGACC
GTTTTGCGGC CATATCAGTT CATTGAACCG GTTGCGAACG GTGTTCCTAT GTCGCCTTCT
CAACTGCGAG CCATCGCCGA AGAAGTGGTG CCGGGTAAAC CGGCCAAAGC GGTTATCTAT
GGCGACGGAG AGCATAGTGC CATTGTTCCC TTTTACGGGG TAGCTCCGGA TTATTACTAT
CAGGTGTATA TGAATCCGTA TACGGGTAAG GTGCTGCACG TACACGATGA GGAAACGGAT
TTCTTTCACT TCATCCTCCA CGGACACTAT TACCTGTGGC TCCCCGAAAC GATCGGGCAG
CCGGTTGTGG CCTACGGGAC ATTGGTATTT GCCATCATGT TGATAACCGG TCTGGTATTG
TGGTGGCCGA AAAACCTGAA GAAGGCCAAT CGGGAGAAAA GCTTCCGCAT CAAGTGGAAA
GCCAAATGGC GTCGGGTAAA TTATGACTTA CACAATGTTC CCGGTTTTTA CGCGCTGTCC
ATCGGTCTGG TACTGGCCCT AACGGGGATG ATTTTTGGCA TTCAGTGGTT CGCCGACTCC
GTGTATTGGG TTAGCTCCGG TGGAAAAACA GCACCGGTAT ATCAGTTGCC TTTGTCCGAT
ACAACGGCCG TTCGACGGTT TGCTGCACCG GAAGACCGCG TCTGGCAGCA GTTGTCAAGG
AGTAAGCCAC ATACCGCCGG ACTTTATATT TCCTTTCCAG AAAAAGCGTC GGAATCCATC
TTTGCCTACG TCAACTACAA ACCCGGCACC TATTATAAAA TGGATTACTA TTCGTTCGAT
CAGCACACGC TGAAACCGCT GATAACCGAA GGGCCTTATT CCGGTACCTA CGCGAAAGCT
GGTTTTGGCG ATAAGCTTCG CCGGATGAAC TACGACATTC ATACCGGTGC CATACTGAGT
TTACCGGGTA AACTACTGGC TTTCTGCGGC AGCCTGATCT GTGCTAGTCT ACCCATTACA
GGTACTATCA TCTGGTGGGG ACGTCGGAAA AAGAAGTCAC CTGCCGTGAA ACAGTACGCC
AGCCAAAGGG TCAGGGAAAA AGTCTGA
 
Protein sequence
MTAKKLIGKV HLWLGLSSGL LVFVVAITGC VLAFEQEIKT VLRPYQFIEP VANGVPMSPS 
QLRAIAEEVV PGKPAKAVIY GDGEHSAIVP FYGVAPDYYY QVYMNPYTGK VLHVHDEETD
FFHFILHGHY YLWLPETIGQ PVVAYGTLVF AIMLITGLVL WWPKNLKKAN REKSFRIKWK
AKWRRVNYDL HNVPGFYALS IGLVLALTGM IFGIQWFADS VYWVSSGGKT APVYQLPLSD
TTAVRRFAAP EDRVWQQLSR SKPHTAGLYI SFPEKASESI FAYVNYKPGT YYKMDYYSFD
QHTLKPLITE GPYSGTYAKA GFGDKLRRMN YDIHTGAILS LPGKLLAFCG SLICASLPIT
GTIIWWGRRK KKSPAVKQYA SQRVREKV