Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5728 |
Symbol | |
ID | 8729503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6967959 |
End bp | 6968843 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | OmpA/MotB domain protein |
Protein accession | YP_003390492 |
Protein GI | 284040562 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0122218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAG TATTGATAAT TTTTGCGGCC GTAACTATGT TGGCTTCCTG CAACAGCAAG AAGCGTCTGG CTGAGATTAA AGCGTTGCAG GATGCCCGTG ATAAGGCAGT AGCCTCATTG AATGACTGTG ATCAGCGTAC GGCTACTCTT CGTTCACAAC TGTCGGCTAA AGACACTGAC CTGCAAGGAA AAGACAAGCA GGTAGGTGAT CTTCAGGCTC AAATTGACTA CCTCAAAAAG ACAAACATCA ACCTCCTCGA CCGGATGTCT GATTTGTCAA TTGTGAGTAA GTCGGGTGCT GAAAGCATTC GTAAATCGCT CGAAACCCTG AACGAGCAAA CGAAGTACAC GAATAACCTG AACTCGACCA TTCAGCGTAA AGATTCGTTG AATCTGGCAC TGGTCATGAG CCTGAAACGT TCGCTGGACG ATATCAACGA CCAGGACGTA CAGGTAGAGG TGAAGAAAGG GGTTGTGTAT GTATCGATCT CGGATAAACT GCTGTTTAAA TCGGGTAGCT ATGACATCAC ACCGAAAGCA GAAACGGTAC TGGGTAAAGT AGCTAAAGTA GTAAACGACC ACAAAGATCT GGATATCCTG GTTGAAGGTC ATACGGATGC TGTCCCCATT TCTACGCCAG CTATCAAAGA CAACTGGGAC TTGAGCGCCC TGCGTGCTAC ATCGGTTGTT CGTACGTTGC AGGCTAAATT TGGTGTTGCT CCCGAGCGTC TGACAGCCGG TGGCCGGTCG GAGTTCGCGC CAAAAGATGA CAATACAACG GCTGTTGGTC GTCAGCAGAA CCGTCGTACG GAAATCATCA TTACCCCAAA ACTTGATCAA TTCTTCAACC TGTTGTCGAG CGGTCAGGCT GGCGGTAGCA AATAA
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Protein sequence | MKRVLIIFAA VTMLASCNSK KRLAEIKALQ DARDKAVASL NDCDQRTATL RSQLSAKDTD LQGKDKQVGD LQAQIDYLKK TNINLLDRMS DLSIVSKSGA ESIRKSLETL NEQTKYTNNL NSTIQRKDSL NLALVMSLKR SLDDINDQDV QVEVKKGVVY VSISDKLLFK SGSYDITPKA ETVLGKVAKV VNDHKDLDIL VEGHTDAVPI STPAIKDNWD LSALRATSVV RTLQAKFGVA PERLTAGGRS EFAPKDDNTT AVGRQQNRRT EIIITPKLDQ FFNLLSSGQA GGSK
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