| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5724 |
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| Symbol | |
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| ID | 8729499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6960740 |
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| End bp | 6963568 |
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| Gene Length | 2829 bp |
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| Protein Length | 942 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | |
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| Product | TIR protein |
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| Protein accession | YP_003390488 |
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| Protein GI | 284040558 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00541848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATTAAAC TATTTTACTC CTATTCACAC AAAGATGAGG TAATTAGAGA AAAGCTGGAA
ACACATTTAT CTACACTTAA AAATGCTGGC TATATTACAG AATGGTATGA TAGGAAAATA
CTACCAGGAG AAGAATGGGA TAAAAAAATT AATGATAAGC TAGATGACTC AGATATAATA
CTATTATTAA TTAGCTCAGA TTTTTTAGCT TCAGATTATT GTTACGGGCA TGAAGTAAAA
AGGGCAATTG AACTGCATAA CGAAAATAAA GTATTGGTCT TACCTATAAT TTTGAGATAT
TGCGATTGGA AACTCTCAGA TTTTGAGCAT TTACAATGTC TTCCAAAAGA TGCTAAACCT
GTATGTAGTA GCTATTGGGA AAATGAAGAT TTAGCCTTTT TAAATGTTGT TGAAGGTATA
AAAAAAATAG TTATAGAAAT TAAAGCTAGA AAAAATATAG AAATTACTTC CCCTTACGTA
TCAAAGGTAA CTTTCTCAAT CGGCGGCTTT GATTATTACA TAGACAAATA CATATTAGAT
AATAATTCAT TCGTTGGTAT AGATTTTGGT ACGTCAACGA CAGTCGTCAG TTTAGCAAGA
TTAGACAAAG ATGAAAATAA GGTAACATTA GAAACAATTT CGTTTGATTT CAATACAGAA
ACTCATGGGG CTCAAAAATC TGCATTAATT CCATCTGCAC TATATTTCGA TGAAAAGACT
AAAACCCTTT ATTCAGGGAA TGAAGCAAAG CTGAGAAGAT ACTCTTCAAA TACTATAGAA
GGAGTAAACT ACTTGAGTTC TTTTAAAATG GGGTTAGGTA AAGACATGGG TAATATATAT
ATTAATTCAG CAATTAAAAG TGATACAGAA AAATATAGAA TACTTAACCC CAAGGATGCA
ACAAAGGAGT ACTTTAAATT TATAAAAAAT AGAATTGACC AGTACATTAT ACAAGAAAGG
TTGCCAAGCG GCCTAAAACT ATGCGTAAGT ATACCTGCTT CGTTTGAGGC AAATCAAAGG
AGGGAGTTAC TTGAAGTAAT AAAAGAAGTT GATTATGAAG CACACGAAGC AATTTTTATT
GATGAGCCAA ACGCTGCTTT TTTAAATTAT ATCCAAGAGG AGCTTAATTA TAAACTTCTT
AATCTTAATG ACTTTGAAAG ACAATACACG CTTGTTTTTG ATTTCGGAGC CGGGACTTGT
GATATTTCAA TTTTAGAATT TGGGAAGAAA AATAAAGGAT TTTATTCAAG AAATATAGCT
ATATCAAAGT TTGAACAATT AGGTGGTGAT GATATCGATA AAGTAATAGC AAAAAAAATT
CTATTCACTG AATTCTGCGA AATAAACGAA TTAGATATTG ACGCAATATC TGATATAGAA
TATAAAGAGA TATTCGAAGA AAAATTAAAA TTACCAGCTG AGTCACTAAA AATAAAGGTT
TGTGATAAGC TAAAACGGCT AAAAGATAAA GCTAAAAAGG ATGCAACTAT ATTTCTTGAA
GAGACTTTAA TTTTCAGATA TAAAGGTAAA GAATACTATT ATGATTCTCA GTCAATAAGC
TTTGGACAGT TTGAGGAAAT AATGGCTACT TTTATCAAAG ATGAGACAGA AGAAGATTTC
TCTATTTACT TTATAATTAA TTCTGCTTTA AGAAAAGCAA AAATGAATAA GAATGACATT
GATAATATTT TACTTATTGG AGGATCTTGC AAAAATCCTT TAATTGGAAA AAGCTTGAGG
GAAAATTTCC CAAATGTGAA AATCCTTTTT CCAACTGACT TACAGCTTCA AGTATCAAAA
GGAACAGCAA TTCATTCCGT ACTTTCTTTA GGCTTAAATA AACAGCTAAT AGCACCGATA
GTTAGTGAAT CAATATCAAT ACTTTTATAT GAAAAAAAAC ATTTAAATAT TATCCAACAA
GGGGAAGAAA TACCTCATTT TAAAGCAGTC ACTGATCCAC TTACAGTTCA ACGCAATGGA
CAGACAACCA TAGAAATGCC AATTTTTGTC TCTGGAGAAA AAAAAATGCT GCAAAATATA
GTAATTAAAA ATGAAAATGG ATTTTTAAAA AGTGATGAAA TTTGGATTAG TGCTGAAATT
GACAGGAATA AGATCGTCAC CTTTAAAGTC ATTTGTAACA ACAAGCCATT AGAAGTTTTC
CATATATCTC CTTTCGCAAA TGAAGTTCTT TCACCATACA AAAGAGCCGT CAAAGAAATA
GAAAGAGAAA TAAACAACTT ACTATCAAAC AACATACATG TAAATAATCA AAAAATTATC
GAATTGGTTG ATACACTTCT TCTCTACCAT ACTTCTATGA ATAATTTTAA AGAAGCAATG
GAAACAACTA TTAAATTTTA CCCAAATCGG TACTCTGATA TTTCATATTA TGCAGATTGT
GCAGGATACA ATAAAATTTC AACAGAATTT GCAATAAAAG CTTTTCAAAG TAATCCAAAT
GAAACAAACG CATACAATAT CGCATTGGCA TTTGAAGAGA ACTCATTAGA ATTTAATAAA
TATATGAAAA TTGCGTCTGA TCTTGGAAGT ATGCCAGCAA AAATTGTAAT TGCAATAAGA
GAAATGACAG AGGGTAATGA ATATGGAAGA AAATTAATGC AAGAACCTTT TGATTCATTG
TTTAAAATCT ATCAAACTGA CAGAAAAAAC ATGACAGTTA GCGAATTGGA TGACCTATTA
TTAACATCGG AATATTTAGG ATACACTAAT TTAACGGATG AAGTGAATAA AGTTTTAGAG
CAAAAAATCG AACTACTAAA AACGTCAAAT GTACTTTTCC AAGAGGGAAA TCTACTTAAA
GAAAAATGA
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| Protein sequence | MIKLFYSYSH KDEVIREKLE THLSTLKNAG YITEWYDRKI LPGEEWDKKI NDKLDDSDII
LLLISSDFLA SDYCYGHEVK RAIELHNENK VLVLPIILRY CDWKLSDFEH LQCLPKDAKP
VCSSYWENED LAFLNVVEGI KKIVIEIKAR KNIEITSPYV SKVTFSIGGF DYYIDKYILD
NNSFVGIDFG TSTTVVSLAR LDKDENKVTL ETISFDFNTE THGAQKSALI PSALYFDEKT
KTLYSGNEAK LRRYSSNTIE GVNYLSSFKM GLGKDMGNIY INSAIKSDTE KYRILNPKDA
TKEYFKFIKN RIDQYIIQER LPSGLKLCVS IPASFEANQR RELLEVIKEV DYEAHEAIFI
DEPNAAFLNY IQEELNYKLL NLNDFERQYT LVFDFGAGTC DISILEFGKK NKGFYSRNIA
ISKFEQLGGD DIDKVIAKKI LFTEFCEINE LDIDAISDIE YKEIFEEKLK LPAESLKIKV
CDKLKRLKDK AKKDATIFLE ETLIFRYKGK EYYYDSQSIS FGQFEEIMAT FIKDETEEDF
SIYFIINSAL RKAKMNKNDI DNILLIGGSC KNPLIGKSLR ENFPNVKILF PTDLQLQVSK
GTAIHSVLSL GLNKQLIAPI VSESISILLY EKKHLNIIQQ GEEIPHFKAV TDPLTVQRNG
QTTIEMPIFV SGEKKMLQNI VIKNENGFLK SDEIWISAEI DRNKIVTFKV ICNNKPLEVF
HISPFANEVL SPYKRAVKEI EREINNLLSN NIHVNNQKII ELVDTLLLYH TSMNNFKEAM
ETTIKFYPNR YSDISYYADC AGYNKISTEF AIKAFQSNPN ETNAYNIALA FEENSLEFNK
YMKIASDLGS MPAKIVIAIR EMTEGNEYGR KLMQEPFDSL FKIYQTDRKN MTVSELDDLL
LTSEYLGYTN LTDEVNKVLE QKIELLKTSN VLFQEGNLLK EK
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