Gene Slin_5662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5662 
Symbol 
ID8729436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6897300 
End bp6897815 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content46% 
IMG OID 
ProductHNH endonuclease 
Protein accessionYP_003390426 
Protein GI284040496 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAGGA AAGTATTAGT CTTAAATCAA GATTACAGTG CATTCAGCAT CTGCTCCGTT 
CCCAAAGCAT TCTTGCTGGT CTATTTGGAT AAAGCAGAAC TTGTTGCAGA ATCTGAGCAG
TTCATGCTTC GAACCGTTTC GGCGGAATAC CCGATGCCGT CAGTTATTCG TCTTCACCGG
TACGTTAGTC TTCCTTACAA AGGAGTAATG CTCACCAGAC AGAATATCTT TAAGCGCGAC
GGACATCATT GTCAGTATTG TGGCACAACA GAAGACTTAA CGCTTGATCA CGTACTGCCA
AAATCGAGAG GGGGTAAGAC CAGTTGGGAT AACCTGGCAA CTGCCTGCAA GCGATGCAAC
TCCCGAAAAG GCGATTACAC GCCGGAGGAA GCAAATCTCA AACTACGTCA AAAACCATTT
AAGCCAACAT TCCTGGTTTT CCTAAGGGAG TTTTCCGGCT CGCTGGAGCA AAGCTGGATG
CCATTCCTGG CTAAGAAGGA AAAAGCGTTT AAATAA
 
Protein sequence
MGRKVLVLNQ DYSAFSICSV PKAFLLVYLD KAELVAESEQ FMLRTVSAEY PMPSVIRLHR 
YVSLPYKGVM LTRQNIFKRD GHHCQYCGTT EDLTLDHVLP KSRGGKTSWD NLATACKRCN
SRKGDYTPEE ANLKLRQKPF KPTFLVFLRE FSGSLEQSWM PFLAKKEKAF K