Gene Slin_5625 details

Gene Information

• Locus tag: Slin_5625
• ID: 8729399
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: -
• Start bp: 6851087
• End bp: 6854644
• Gene Length: 3558 bp
• Protein Length: 1185 aa
• Translation table: 11
• GC content: 56%
• Product: SNF2-related protein
• Protein accession: YP_003390389
• Protein GI: 284040459

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 33
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGGAAC GAATCACCTA CGGCAAAACA TGGTGGGGAC AACAATGGCT CAATGCGCTG 
ACCAGCATTG ACATGGCGAA CCGTTTGCCA CGGGGTAAAA CTTACGCGAA CAAAGGAGCG 
GTACAGGGAT TGTCTATTTC TCAGAATCAA ATTAGTGCCT CGATTAAAGG AACCGCCCCC 
CGACCGTATA AATCAAAATT ATCGGTACCG CTGTTCACTG AACAGGAAAA AGACTGGCTA 
CTGACCGAAA TCCGGGAGAA CCCGGCCACG CTGGCGCAAC TACTAAACCG CCAGCTTCCG 
CCCGAACTGA CCGAATTTGC GGACACGAGT GATATTCAAC TCTTCCCTCA TTCGTTTCGG 
GACTTATCGA TGGGTTGCTC CTGCCCCGAC GAAGCCGTAC CCTGCAAGCA TCTGGCGGCT 
GTTATTTATA CCATCGCTAA TGAAATTGAC CGGAACCCGT TTCTGGTTTT TCAGCTGAAA 
GGGCTCGACA TTCTGAGTGA ATTACAGAAA TTTCAGGTAG AAGGTATTCA GGGAGCGCTC 
GAAACAGTCC TGTCGTTCAA AGACATTGGT ACCGACGATT TGCCCGACGA CGAAGACTGG 
AAACCCGACG AAAAGGCGCA GGCCAACTTA GACTTTGCCA CCATTCCGGC ACTGACCGAC 
CAGCTTTTAG GCTTGCTTTC GCCCGATGTT ACCTTCACCA AGGGCGACTT TCATAAATCG 
CTGGCGCGGG CGTACAAACT CTTCAGCAAG CCGGTTGATA TTGACCTGAA CGAAGAGCGC 
AACACCACCA GCGTTCCGGC CTTCAGCGAC AGCATTGAGC TACAACTCGA TGAGGTGATG 
ACGGTCAAAA AGATCAACAT GTTCAGCGAA CATGGCGAAC CCCGGTCCAT TCCCGGCTTC 
GACATGAGCG ACCTGATGGC CTGGCTCAAC ACCCTCACCG AAGCAGACTG GGCCGAAATG 
AGCGACTCTG TTCGGGGCTT GTACCTAACC ATGCAGTTTG CAGCGGCACT GCTGCGCCGG 
GGTGCCGTCG TGCCGCAGCT CCTGCGCGTT GGGCCGACGG AAGAACAGTA CCGGGTTCGG 
TGGCTTCCGG CCACGCTCAA CGAAACCGTA AAACGCCAGA CCGATTTGCT GGCCACGCAA 
CTGCCGCCCA CGCTGCTCAC CGTGCGCTGG CAAAAGGAAT GGCTGGCCCT ACCCGATGAG 
CAGCAGGTGC TGACGCTGTG TTCGTTATTT CTGCGCCGGG CCATCAAACC CGCTACCGTC 
GAACTCTGGG AACGCTGGCC GCTGGAAGAT GCCGACCGCC TTTTCTTCGG CGTCGAGACG 
ATACGCTTTG AAGGCTTCGG CCGGAAAGAA ATGCCGCTGG CCATGCAGCT GTGGGTAAGT 
GACTTCTTTC TGACCCACAA GCGGTTTGTA CCCATTCTGG CCGTTGAGGA TAGCGAATCG 
GGCGATGAGT TCCGGCTGAG TCTGCTCATC CGCGACCGCG AAGCCCCCAC CATCAACGGG 
GCACCGACCG CCCCGATTCC CTTGCCAGAC CTGCTCGACA AACGCGCTAA CGGCATCGAC 
CGGCACCAAC GCATCCGAAT GGCCGTTTTG CAGGATTTGC TGGTGCTGGC GAGGCACTTT 
CCGGATCTGG CCAAACTGAC CAAAACAGGT GGCCCGGCTT ATCTGTCCTA CACACCCGAA 
CAGTTCGTGA AAGTCCTACT GGAGCAATTG CCCCGAATGC AGTTGCTCGG TATTGCGCTG 
TTATTGCCCA AGTCGCTCCA GCATTGGGTT CGCCCCGCAG CGGGCGGACG GCTCAAGGCC 
AAAGTCACGG CCAACACCGC ATTTATGCGC CTGGACGACA TGCTAACGTT CGACTGGCAG 
ATTGCCCTCG GCAGCGATAT GGTGAGCGTC AAAGAGTTTC AGAAACTGGT GGGCCGTACA 
ACAGGGCTGG TCAAGATCAA AGACCAGTAC GTGCTTGTCG ACCCGACCGA GTTGAACAAG 
CTTTACAAAC AACTCGAAAA TCCACCCGAG CTAACGGGTA CAGAGTTGCT TCGGGCGGCT 
TTGTCCGAAG AGTTCCGGGG CAATCGGGTT GGCCTGACGG CGGATGTCCG GGAGTTGATT 
CGACAGTTCA CCGAAAGCGA ATCGCAACCC CTTCCCGATT CGCTGGATGC TACCCTTCGC 
CCGTATCAAC AGCGCGGTTA CGACTGGCTC ATTAAAAATA CGGCCCTCGG CATGGGCAGT 
CTGCTGGCCG ATGACATGGG CCTTGGAAAA ACGCTTCAGG TCATTGCGCT GCTGCTTAAA 
TTCAAACAGG AAGGCCGATT TAAGAAACAA AAGGGGCTGG TAGTACTACC CACGACTCTG 
CTTACCAACT GGCAAAAAGA AATTGCCCGG TTCGCACCGG AGTTACAGGC CCGAATTTAC 
CACGGCTCCA ACCGAAAGCT CCCCACCGAA CGCAACGGCG AGTATGACCT GCTGCTGACG 
ACCTACGGCG TTATCCGCAG TGACCTGAAT GAACTGAAGA AGATAACCTG GGCGGTGGTG 
GTCATCGACG AAGCGCAGAA CATCAAAAAC GCCGATACCG AACAGACAAA AGCCGTTAAA 
GCGCTAAAAT CGCCCATTCG CATTGCTTTG AGCGGTACGC CGGTTGAAAA CCGGTTGTCG 
GAGTTCTGGA GCATTATGGA TTTCGTGAAC AAAGGGTATC TGGGCGGGCT GACCAAGTTT 
AACGAGGAGT TCGGCAAGCC GATTCAGCAG GAGCGTGACC ACCAGAAACT CGACCAGTTC 
CGGCGCATTA CGAGCCCGTT CCTGCTGCGT CGCGTCAAAA CTGATCGCAC GATCATCAGC 
GATCTTCCCG ACAAAATCGA GACTAACCAG TTCTGCGCCC TCACCACCGA GCAGGCCGTG 
CTGTACCAGA GTGTGGTGCA GGAAAGCTTG CGGGCCATCG AAGAGAAGGA CGGTATTGCC 
CGGCGTGGTC TGGTGCTGAA ACTCATGACC GCCCTCAAGC AGATTGGCAA CCACCCGCAC 
CAGTATTTGA AAAAAGGTAA TGCGGCCCCG TCGCTGTCCG GCAAGGCAAC GCTCTTGCTC 
AGTCTGCTCG AAACGATTTA CGCCAACCAC GAAAAGGTGT TGATCTTCAC CCAGTACAAG 
GAAATGGGCG AGTTGCTGAC TCAGTTCATC CAGCAGTCAT TTGGTACGCA ACCGCTCTTC 
CTGCACGGCG GCACGTCGCG GCCCGAACGC GACCGGATGG TGGAGCAATT CCAGCGTAAC 
CGCAGCGATC ACACGTTTAT ACTGTCCCTA AAAGCAGGTG GTACGGGGCT AAACCTGACG 
CAGGCCAACC ACGTCATTCA CTTCGATTTG TGGTGGAACC CGGCGGTCGA ATCGCAAGCC 
ACCGACCGCG CTTTCCGTAT CGGCCAGACG AAGAACGTCA TGGTGTACCG ACTCATGAAC 
CAGGGCACTT TGGAAGAGAA AATCGACGCC ATGATCCGCT CCAAACGCGA ACTCGCCGAC 
CTCAGCGTCA AAACCGGCGA AACCTGGCTC GGTGATTTGA GTGATGATGA GCTGAAAGAA 
CTGGTGAGTT TGGGGTGA 

 

Protein sequence

MAERITYGKT WWGQQWLNAL TSIDMANRLP RGKTYANKGA VQGLSISQNQ ISASIKGTAP 
RPYKSKLSVP LFTEQEKDWL LTEIRENPAT LAQLLNRQLP PELTEFADTS DIQLFPHSFR 
DLSMGCSCPD EAVPCKHLAA VIYTIANEID RNPFLVFQLK GLDILSELQK FQVEGIQGAL 
ETVLSFKDIG TDDLPDDEDW KPDEKAQANL DFATIPALTD QLLGLLSPDV TFTKGDFHKS 
LARAYKLFSK PVDIDLNEER NTTSVPAFSD SIELQLDEVM TVKKINMFSE HGEPRSIPGF 
DMSDLMAWLN TLTEADWAEM SDSVRGLYLT MQFAAALLRR GAVVPQLLRV GPTEEQYRVR 
WLPATLNETV KRQTDLLATQ LPPTLLTVRW QKEWLALPDE QQVLTLCSLF LRRAIKPATV 
ELWERWPLED ADRLFFGVET IRFEGFGRKE MPLAMQLWVS DFFLTHKRFV PILAVEDSES 
GDEFRLSLLI RDREAPTING APTAPIPLPD LLDKRANGID RHQRIRMAVL QDLLVLARHF 
PDLAKLTKTG GPAYLSYTPE QFVKVLLEQL PRMQLLGIAL LLPKSLQHWV RPAAGGRLKA 
KVTANTAFMR LDDMLTFDWQ IALGSDMVSV KEFQKLVGRT TGLVKIKDQY VLVDPTELNK 
LYKQLENPPE LTGTELLRAA LSEEFRGNRV GLTADVRELI RQFTESESQP LPDSLDATLR 
PYQQRGYDWL IKNTALGMGS LLADDMGLGK TLQVIALLLK FKQEGRFKKQ KGLVVLPTTL 
LTNWQKEIAR FAPELQARIY HGSNRKLPTE RNGEYDLLLT TYGVIRSDLN ELKKITWAVV 
VIDEAQNIKN ADTEQTKAVK ALKSPIRIAL SGTPVENRLS EFWSIMDFVN KGYLGGLTKF 
NEEFGKPIQQ ERDHQKLDQF RRITSPFLLR RVKTDRTIIS DLPDKIETNQ FCALTTEQAV 
LYQSVVQESL RAIEEKDGIA RRGLVLKLMT ALKQIGNHPH QYLKKGNAAP SLSGKATLLL 
SLLETIYANH EKVLIFTQYK EMGELLTQFI QQSFGTQPLF LHGGTSRPER DRMVEQFQRN 
RSDHTFILSL KAGGTGLNLT QANHVIHFDL WWNPAVESQA TDRAFRIGQT KNVMVYRLMN 
QGTLEEKIDA MIRSKRELAD LSVKTGETWL GDLSDDELKE LVSLG