Gene Slin_5614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5614 
Symbol 
ID8729388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6831292 
End bp6832077 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390378 
Protein GI284040448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.987528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAATG CCTTTCTGAT AATTGATACG CAGTTCGATT TCTGCCACCC GCAGGGTGCG 
CTGTTTGTGC CGGGAGCAGA GCAGGATGTT GAGCGCATGT CGGCGCTGAT CCGGAACCAC
GCCGATCAGA TCGACCACAT TGTCGTTACG CTTGATACCC ATCAGGTACT CGACATTGCG
CACCCGCTTT TCTGGCATGA TGCGTCGGGC AATCACCCGG CCCCGTTTAC CCGTATTTCG
GGCGAAGAGG TCGACGCGGG CCGATGGATT CCCCGCTTTT CACCCGAAAA AGCGATCCAC
TACATTCACA AGCTCGAAGC CGACGGTCAG TTTGCCCACT TTATCTGGCC CGAACATTGT
TTGATTGGCT CGCGTGGGGC AGCGTTGCAC GATACGTTGC TCGACGCGCT CAAGGATTGG
TCGCGTAAGC GGGACCTCGA TTACGTAGCG GTACAAAAAG GACTGTATCC GCTGTCGGAA
CACTTCGGTA TTTTTCGGGC GCAGGTGCCG GATGCCAATG TACCCGAAAC GCAGCTTAAT
ACCGCGCTCA TTACAGATCT GGCTCGTTTC GATACGGTCT ATCTGATGGG CGAAGCAAAG
TCGCACTGTG TAGCCAACAG CCTGAAGCAG CTGCTGGATT TTGCCCCGGA ACTTGTCTCC
AAACTCGTTA TCGTGACCGA CTGCATGTCG GATGTAACAG GTCTTGGCTA TCTTGCCAAT
CCGATTTATG CCGAAGCACA ATCGAGAAAC GTTCGTTTTC TGAAAGCGGA CGCCGTTTTT
AACTAA
 
Protein sequence
MRNAFLIIDT QFDFCHPQGA LFVPGAEQDV ERMSALIRNH ADQIDHIVVT LDTHQVLDIA 
HPLFWHDASG NHPAPFTRIS GEEVDAGRWI PRFSPEKAIH YIHKLEADGQ FAHFIWPEHC
LIGSRGAALH DTLLDALKDW SRKRDLDYVA VQKGLYPLSE HFGIFRAQVP DANVPETQLN
TALITDLARF DTVYLMGEAK SHCVANSLKQ LLDFAPELVS KLVIVTDCMS DVTGLGYLAN
PIYAEAQSRN VRFLKADAVF N