Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5586 |
Symbol | |
ID | 8729360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6800536 |
End bp | 6801891 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | ISPpu9, transposase |
Protein accession | YP_003390350 |
Protein GI | 284040420 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAC AGCTTAACTA TCAGCAAATG CCTGTCATTC ATCAGCAGGT GGCAGGCATT GACATTGGCT CCAAGTTTCA CGTCGTAGCC GTGGGAGACA ATCCCAAAAC CGACGTCAAA GAGTTTGGCG TTTCCACTAA AGCCCTTTTT GAGATCGCGC TTTTTCTCAA AGAGAATGAC GTTCAGCACG TTGCTATGGA AGCCACCGGA GGCTACGAAA AACCACTGGT GAGCGTCCTC CAACAGGAAG GCTTTGACGT GTTAGTTACA GCTGGAGCCA ACACCAAAAA CTACCGACGC TTCAAGTCAG ACGTGTCAGA TGCCATCCAT ATCCGAACCC TGCATCAGTT AGGTTTACTA CCCCCTATTT TCATCACCGA TGAGTTTGCT ACCACCATTC GGCCACTGGT GCGGATGCGC CAAAGCCTCA TTGAAGATGG GGCTGACTAC ATCCGGCGCA TCCAAAAGAC GCTTCGGCTG ATCAATGTGC GCTTAGATGC CACCTTGACC GATTCCACTT CCGTGTCGGG CTTGGCGATC ATCAAGGCAA TTTGTGAGGG CGAAGAGGAC GGGGCAATTC TGGCGGCCCT GGTTGATAAA CATTGTAAGA AGACACCTGC CGAACTTACC CAATTGCTAA CGGGAAATTG GACACCTAGT ATACGACTAC AAGTGCAGTC GTCCTACCGG CTTTATCAGG CCGTTCAGGC TGAAATGACC CGGTTGGATG CCGAGTTAGA CCGACTCTTC ACAGAGCATA CTCAACATTT GCCTAGAGCC GAAGCGACTA AAAAGAAGCC TCGTAAGCAC AGGAATGCAC CTAAAGTAGC GGTGGAACAG TATGCTCGGC AGATGTTAGG GGTCAATTTG CATGAGATAC CAGGCTTTGG TCGCACGGCC ATCCTAACAT TGATGAGTGA AGTAGGCGAA AGTATCCACC GTTTTAACTC AGCAAAAGCG TTTGCCAAGT GGTTGGGTTT TACTCCCAAT AATAAAGCAT CTGGGGGTAA ACTACTGTCG CGCAAGACTT TGAAGAACAA ATCGAATCTG CCCAATACGT TCCGTCAGGT GGCTAATTCG ATTGGTAACA TGAAGGACTC CAATCCGTTG GTGAACTTCT TTCGGCGGGT AGCCTTCAAA TCCAGCCGCA AAAAAGCCAT CACGGCCACA GCAAGAAAGT TAGCCGTGCT GGTCTATACG ATGTTGAAAA GAGGGGAAGC TTACCAACCC GAAAAGCTGG AACGGGATCA GGAACAAGTA AAGGTGATGC AGATCCGCAA AATCAAGAAA AATCTGCATA AGTTTGGTAT CTCGATTCAA GATTTGGGCT GGACGGTGGA CTTTCAGACT GCTTGA
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Protein sequence | MKEQLNYQQM PVIHQQVAGI DIGSKFHVVA VGDNPKTDVK EFGVSTKALF EIALFLKEND VQHVAMEATG GYEKPLVSVL QQEGFDVLVT AGANTKNYRR FKSDVSDAIH IRTLHQLGLL PPIFITDEFA TTIRPLVRMR QSLIEDGADY IRRIQKTLRL INVRLDATLT DSTSVSGLAI IKAICEGEED GAILAALVDK HCKKTPAELT QLLTGNWTPS IRLQVQSSYR LYQAVQAEMT RLDAELDRLF TEHTQHLPRA EATKKKPRKH RNAPKVAVEQ YARQMLGVNL HEIPGFGRTA ILTLMSEVGE SIHRFNSAKA FAKWLGFTPN NKASGGKLLS RKTLKNKSNL PNTFRQVANS IGNMKDSNPL VNFFRRVAFK SSRKKAITAT ARKLAVLVYT MLKRGEAYQP EKLERDQEQV KVMQIRKIKK NLHKFGISIQ DLGWTVDFQT A
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