Gene Slin_5569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5569 
Symbol 
ID8729343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6780369 
End bp6782426 
Gene Length2058 bp 
Protein Length685 aa 
Translation table11 
GC content52% 
IMG OID 
ProductDNA mismatch repair protein MutL 
Protein accessionYP_003390334 
Protein GI284040404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.590077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAACG TTATTCAGCT ACTACCCGAT TCGATTGCTA ACCAGATTGC GGCTGGTGAA 
GTTGTTCAGC GCCCCGCTTC GGTAGTGAAA GAGTTGCTGG AAAACTCGGT AGATGCGAAA
GCGAAATCCG TGCAGGTCAT TGTTCGGGAA GCAGGCCGTA ACCTGATTCA GATTGTGGAC
GACGGTGTCG GCATGACCGA AACCGATGCC CGCATGAGTT TCGAGCGCCA TGCTACCTCC
AAAATCCGTT CGTCGGACGA TCTGTTCCGG ATTCGGACAA TGGGCTTCAG GGGCGAAGCG
CTGGCGTCGA TTGCCGCCGT TGCTCAAATT GAAATGCGCA CACGTAGGGC CGAAGAAGAA
CTCGGTACGC TAATTCGGAT TGAAGGATCT GACATTAAAG CGCAGGAAGC TATTTCGTGT
TTACCCGGAA CGAACCTGCT GATCAAGAAT CTGTTCTTCA ACGTACCCGC CCGGCGCAAT
TTCCTAAAGT CGAATTCGGT GGAAATGCGT CATATTATCG ACGAATTTCA GCGCGTGGCC
CTCGCAAACC CGGAAGTTGC GTTTTCACTG TTTCATAATG ATCAGGAAAT TTACAACCTC
CCGGCCGGGA AGCTGAGCCG ACGCATTGTC GATATGTTCG GGAAGAGCTA CCGCGAGCAG
TTGAACTTCT GCGAAGAACA AACACCGTAT GTAACCGTGC ATGGGTACAT CGGCAAACCC
GAATCGGCCA AGAAAGCCCG CAACGAACAG TTCTTCTTCG TCAACAATCG ATTTATTAAG
CACAATTACC TGCACCACGC GGTAGTAGGC GCGTACGAGG GTACACTGCC CGAAGGTAGC
CATCCCTTTT ATGTGCTGTT CATCGACATT GACCCGTCGC ATATAGACAT TAACATTCAC
CCGACAAAGA CGGAAATAAA ATTCGATGAC GAGCGGTCGG TATATGCCAT TATGATGGCG
GCCGTTCGGA AAGCGGTGGG GCTTTACAAC CTCTCCCCTT CCCTCGACTT TGATTCGGAT
GTCAATTTTC TGGCGGGTGT TCGTCCAAAG CCTGTATCGA CCGATGTCAA TGTCAATCGC
AACGGTAATG CTGATAGTAA GTCCGCCACC AGCGGACCGG GTTCGGCGCG GCCTATTTCA
CCGTCCTGGG CATCGGGAGC AACACAGCAG CCAGCTAATG AGCGAACGTC TTTACGAAAT
GAATCGCTGG ACAAAGCTGC GGGCAGTAGT TTCGATATAC CCCGAAAAGC TGATCATAAG
CCTTCTGTCA ATAACTGGCA AACGCTGTAC GAAGGTGTAG CAGGCAACGC AAGCCCATCA
CCGGGACCAG TAGCGCAGCC GGTGGAGAAG GGCGACTGGC TGGGACCAGC GAAACCAGCA
CCTGCCATCA CCGAGCCGCC AACAGCGGAA AGTGAACCTA TTACGCTGGG GAGCCGGGCC
AATCAGTTAC AGGTAAGTTT GGAATCGCCC GAACAAGATG TTCCCGTACT GGTTGATGAT
GATAACATTG TTCAGATACA GAATCGGTAC TTACTGGCCC CCATTAAGTC GGGTATGCTG
TTGATCGACC AGCGCCGGGC CCACGAGCGA ATCCTGTACG ATCAGTTTCA TGCATCGCTC
ACTAAACGAA ATGGAGCCTC GCAGCAGTTG TTGTTTCCTA AAACGATAAC GCTGATGCCG
GTAGATTTTC AGTTGGCACT TGACCTGCGC GATGATCTGA CGAATTTGGG CTTCGAGTTT
GATGAACTAG GTGCCAATAC GTTTGTCATC CGGGGTGTAC CTGCCTTGAT TATGGGCGAA
AATGAAGAGG AATTGTTTGC TAACCTGCTG GCGCAACTCC GGGCCGATAC AGGCCGGTTA
AAATTGGACC GAATTGAATC CATGGCCCGT TCACTGGCAC GCCGGTCGGC TATGCGTTAT
GTAAATCGCC TGAGCACTAC GGAGCGAAAG GCTTTAGTCA ATCAATTGTT TGCGTCTGCT
AACCCAAGCT ACACACCTAC CGGAGAGCCG GTAACGGTTG TGTTGTCGTT GGATAAAATT
GCAGGTCTAT TTCGCTGA
 
Protein sequence
MLNVIQLLPD SIANQIAAGE VVQRPASVVK ELLENSVDAK AKSVQVIVRE AGRNLIQIVD 
DGVGMTETDA RMSFERHATS KIRSSDDLFR IRTMGFRGEA LASIAAVAQI EMRTRRAEEE
LGTLIRIEGS DIKAQEAISC LPGTNLLIKN LFFNVPARRN FLKSNSVEMR HIIDEFQRVA
LANPEVAFSL FHNDQEIYNL PAGKLSRRIV DMFGKSYREQ LNFCEEQTPY VTVHGYIGKP
ESAKKARNEQ FFFVNNRFIK HNYLHHAVVG AYEGTLPEGS HPFYVLFIDI DPSHIDINIH
PTKTEIKFDD ERSVYAIMMA AVRKAVGLYN LSPSLDFDSD VNFLAGVRPK PVSTDVNVNR
NGNADSKSAT SGPGSARPIS PSWASGATQQ PANERTSLRN ESLDKAAGSS FDIPRKADHK
PSVNNWQTLY EGVAGNASPS PGPVAQPVEK GDWLGPAKPA PAITEPPTAE SEPITLGSRA
NQLQVSLESP EQDVPVLVDD DNIVQIQNRY LLAPIKSGML LIDQRRAHER ILYDQFHASL
TKRNGASQQL LFPKTITLMP VDFQLALDLR DDLTNLGFEF DELGANTFVI RGVPALIMGE
NEEELFANLL AQLRADTGRL KLDRIESMAR SLARRSAMRY VNRLSTTERK ALVNQLFASA
NPSYTPTGEP VTVVLSLDKI AGLFR