Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5418 |
Symbol | |
ID | 8729185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6589341 |
End bp | 6590447 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_003390184 |
Protein GI | 284040254 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAACAGG TTTACGAGAA CTTTTCATCG GCCGAGTTTT TGACAGACGA TGCGTTTGTG CATCATCAGC TTGAGCCAAC ACCCCAATCG ACTCAGTTTT GGGCTGGCTG GCTGGCCAAA TACCCGCACT GCCAGACAGA ATACCAGCAG GCCGTCGATT TTGTAGCTTC CATTCGTTTG GGCCTGACTG CGTACGCTGA AACGGAAATA TCGGAAGAGA CGATTCAACA ACTGCTCACT CGAATTCGGC AAACGAACGC CCAGACCCGG CTAACTCAAC CCGCCGTCCG TTCGTCGGGC TGGATGCAGT GGGCGGCAGC GGCTGCTGTT TTTCTGGCGC TGGGTGTGGA TTTCTGGTGG AAAATCACGC AGCGCCCTAC CCTTTACGAG CAACAGCTGG CCACGCTGCC AAATGCCTTT TCTGAAAAAA TAAACACCAG CCCGCACGTT CAGACCATTC AACTGCCCGA TCAGTCGGTC GTTTCGCTGG CTCCCGAGAG CCGGATTAGC TACCCGACCA ATTTCGGTCA GCAGAACCGG ACTGTTTATT TATCCGGCGA AGCGGCCTTC AGCGTAACCA GAAATAGTGA AAAGCCCTTT TTAGTACACG CCAATGAAGT CGTTACGAAA GTGCTCGGAA CGCGATTTAC CGTGCGGGCC TTTGCCGGGG AAAACCGGGT GCAGGTGCAG GTGCAGTCTG GTCAGGTGTC GGTATATCGG AATGAGCCGA CGAACGCATC TGTTCGGCAA AAAGGGGTAA TGCTGATGCC CAATCAGCAG GTTGTCTTTA ACCGCGAAAC GGACCAGTTT GATAAAATGC TGGTTGAAGC CCCCACCCTC GTCCTCACCC CGACCCGCCA GAAGAAAGCG CCCTCGTTTG TTTACAACGA CACGCCCATT CCGCAGGTAT TGCAGGAGTT GACAGAAGCC TACGGAATAG ACATCCGCTA CAATAAAGAA GCCCTCGCCA ACTGCCAGCT AAACTCGTCC ATGACCAACG AATCGTTCGA GCAAAAGCTG ACTATCGTTT GCGCTACTGT TGGCGCTACG TATGAGATCA TCGACGGGCA GGTCATTATC AACGGAGGCA ACTGCCAGCC GCAGTAG
|
Protein sequence | MEQVYENFSS AEFLTDDAFV HHQLEPTPQS TQFWAGWLAK YPHCQTEYQQ AVDFVASIRL GLTAYAETEI SEETIQQLLT RIRQTNAQTR LTQPAVRSSG WMQWAAAAAV FLALGVDFWW KITQRPTLYE QQLATLPNAF SEKINTSPHV QTIQLPDQSV VSLAPESRIS YPTNFGQQNR TVYLSGEAAF SVTRNSEKPF LVHANEVVTK VLGTRFTVRA FAGENRVQVQ VQSGQVSVYR NEPTNASVRQ KGVMLMPNQQ VVFNRETDQF DKMLVEAPTL VLTPTRQKKA PSFVYNDTPI PQVLQELTEA YGIDIRYNKE ALANCQLNSS MTNESFEQKL TIVCATVGAT YEIIDGQVII NGGNCQPQ
|
| |