Gene Slin_5412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5412 
Symbol 
ID8729179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6582394 
End bp6583167 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390178 
Protein GI284040248 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000178114 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAC AGAACAAGCA GCGAACGCTT CGGTTGTTTG CGCTACATGA ATTCATTCAG 
GACCACTTTA CCAAGTCTGA CTGGATCAAA GTAGCGTACT TGACCGACAG CCTTGACTTA
ATTGAAGATC ACCCGCGATT GTTGCGGAGC CTTGACTTTA AAGACGATGA TTATGAGGGA
AATAGCTTGC AGGTTCTGTC GAAGTTGATT AGCGAAAGCA GCAGTAATCT ATACGAGATA
GAGCACTTTA TAGAAGCTAA AAAAGCCACC ATGCACCGGC CCGTGCGTGA CGTTCCCGAC
TTTATTTCTA CCGTTCAGAG CCGGCAGCCG GAGCGGGTCA TTACGTTTGC ACCAGATGTT
TTTCGGATAC CGGATAAACC CGTCGAGTCG AATATACTAT CGGTGATGAT GCCCTTTGAA
AGTCGGTTTT CGAGCACGTA CACCGCCATT CGAAATGTAT GCGACCGGCT GAGTATCGAG
TGCAAACGGG CCGACGACAT CTGGGATAAC AGCATTCTGA TTCAGGACGT ATTCGACCTG
ATCTTTACGT CACATGCCGT TATTACGGAT TTCACCGACC GAAATCCAAA CGTATTTTAC
GAAACGGGTG TGGCGCACAC GCTGGGTAAA CTGGTTATTC CGATCACGCA ATCGACCAGT
GATATTCCCT TCGATCTACG CCACCACCGT GCCCTCACGT ACCTGCCCAA CACCGAAGGA
TTACTAAAGC TGGAAACCGA CCTTGAAAAA AAACTGGCGA AAGTGTTTAG TTAA
 
Protein sequence
MTRQNKQRTL RLFALHEFIQ DHFTKSDWIK VAYLTDSLDL IEDHPRLLRS LDFKDDDYEG 
NSLQVLSKLI SESSSNLYEI EHFIEAKKAT MHRPVRDVPD FISTVQSRQP ERVITFAPDV
FRIPDKPVES NILSVMMPFE SRFSSTYTAI RNVCDRLSIE CKRADDIWDN SILIQDVFDL
IFTSHAVITD FTDRNPNVFY ETGVAHTLGK LVIPITQSTS DIPFDLRHHR ALTYLPNTEG
LLKLETDLEK KLAKVFS