Gene Slin_5378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5378 
Symbol 
ID8729143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6539006 
End bp6539476 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content47% 
IMG OID 
ProductTonB family protein 
Protein accessionYP_003390144 
Protein GI284040214 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACAGC AGCGAAGAAA CAACACTGTT TATACCGGAA TCGCCTTGTC AATTTACACG 
CTCCTGATTG GTTTGGCAGT AGCCTGTAGC CAGCGAACGC AGGCCACTCA GTCAGGCCAG
GCAACCAGCC AATCCCCAAT TGAGGGGGAA GTTTTTACGG TTGTGGAGGT ACCTCCAAGT
TTTCCGGGTG GCAATGCCCG GCTCAGCAGC TACCTACAGG AGAATTTGCG CTATCCTGAA
GCAGCTATAA AAGCGAAAGT TCAGGGTAAA GTATTCGTCT CATTTCTGGT GATGAAAGAA
GGTACTATAC GGGATGTAAC TATTTTAAAA GGCTATAGCT ATGGCATTAA TGAAGAAGCG
ATCCGCTTAA TACAGGCCAT GCCAACCTGG GTACCCGGCA AGCAGGCTGG CCACGCTGTA
AATGTAAAAT ATAACCTGGT TGTTCCTTTT GAATTAGCCA GTCTAAAATA A
 
Protein sequence
MIQQRRNNTV YTGIALSIYT LLIGLAVACS QRTQATQSGQ ATSQSPIEGE VFTVVEVPPS 
FPGGNARLSS YLQENLRYPE AAIKAKVQGK VFVSFLVMKE GTIRDVTILK GYSYGINEEA
IRLIQAMPTW VPGKQAGHAV NVKYNLVVPF ELASLK