Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5333 |
Symbol | |
ID | 8729098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6495471 |
End bp | 6497720 |
Gene Length | 2250 bp |
Protein Length | 749 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | P-loop ATPase and inactivated derivatives-like protein |
Protein accession | YP_003390101 |
Protein GI | 284040171 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.300834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATGA ACACCGACCA AAAGCTAGTT TCCGTATTCA GAAATAAGTT TGATAACGGA CTTTTAAAAG ATGGCCAGCC AGACCCGAAA CGGCTACCAG ATATTGACAT ACGGGAATTT TTAGAGGGCG TCAAAAATGG CGTCTGGCGC AAGCCTGTCG AATATGTACG GGCTGTAGTC GACAATAAAG CCGAATACGA CAAACGCAAA GCGAACATAC CTGGCGTTAC CATTTGGGGT ACGTTCATCA TACGAAATGC CGGTAAATCA GACGTTCCAA GCGGTCTAAT GTCGGTCGAC CTGGACCACC TGGAAGAAAG CGAAATCCAG CGGGTGTTTA ATCTGCTGAA GTCAGACCCG TACGTTTATG CGGTCTTTCG CTCGGTCGGT GGTAAGGGGC TTTGTGTGAT CTTTCGCGTA GACTACCAGC GCTGGTTAGA ATCCTTTGAG GGCATACGTA TATACCTGAC CGAACAACAT GGTTTAGTAA TGGGTTGGGA CGCCAGCGTT AAGGATATTT GCCGACTGCG GTTTGTGTCG TACGATCCAG ACACCTACGT AAACTACAAA GCGCAGCTAT TTAAGAAATA CCCGCGAAAG GAAAAGAAAG AGGTAGTAAA GCTACCATAC ACCCACACCG AAACAGATAT TCGTTATGTC CTGGACCAGA TTCACGCCAG GGCGTTAGAC CTGACTGGAT CGTACGAAGA CTGGTTTCGT ATCGGCTGGG CGCTGATTAG TCAGTATGGT GAAGTAGCCA GGCCAATTTT CCACGAGGTT AGCCAGTATC ATAGCTCGTA CGATTCGAAC GACTGCGACA AAAAGTTTAA CTACCTGGTA GCCACACGGC CACACTCGAT TAAAATAGCT ACGTTCTATT ACTATTGCCG CCAGGCTGGT TTAGATACAG CGACACCACA AACAAAGGAA GTTCAAAGCC TGGCCGCTAT GGCAAAGAAG CAGAAGGTAA GTATACCCTC TGCGGTTGAT ACGGTCCTAA GAATGACCGA TATATCAGAA GCAGAAGCCA GGCCAATTAT TGAACAGGTT TACGCTAGTA CTGAAGATTT TGCAACACAA GAAACCATAT ATGAACAAGG GGTAAGACAC ATTCAATCCC ATTTTCTATT TTATAACGAA GTGTCACGGC GTATCGAAAG CCCTAGCGGT TCCATTTTCG GAAAATGGGA AGTCAACGAA TTGTATAATG AGGTACTAAT TCTATTTGAC GGAAAATTAG GCCGCCAAGC TTTTGAATCG CTACTTTTTT CCCGCAAGAC GGTTCCACCG ATTAACCCAT TAAAACAGTT TTTTTCTCAA CACCAGCATA ATAAGCCTAC TGGTATTATC TCCCAATTAG CTTCAAGTAT CGAAACAGAT ACAGGATGGG AGTTAGACCA GTTTGCACCT AGCTATACTG AGTACTTCTT GAGAAAGTGG CTTATTGGTT TGGTCGCACT AGCTTTCGAT AATTTATGCG ATTTAATGTT GATCCTAACA GGTCCCCAAA ATGTTGGGAA AACCGAATTT TTCAGACGCC TATTGCCTGA AGAACTACGA CGTTACTTCG CAGAAACTAA GTTAGACCGG GGCAAAGATG ATGAGATACT GCTTTGTGAA AACTGGATTG TCTTTTTGGA TGAATTGTCA GGCAAGTCAT TTCAAGACGT TGGATTAATG AAAAATTTAC TTTCCAGTAA AGTTTTTGAC CTCCGCGAAC CCTACGGCAG CACAAACGTA AAGCTAAAAC GAAGGGCCGC ACTTTGTGGT TCGAGTAATC CACAAGCCAT ACTAAGCGAC CCAACAGGCA ATAGGCGAAT CATTCCCATT AACGTGCTTT CGATTAATCG GGAAGCCTAT AATGCAATTG ATAAAACAGA TTTGCTCATG GAAGCTTATT GGGCTTATAT AGCTGGTGAG CCTTATTCTT TATCAAATGA AGACATTCAG TATCTAAACG ATAATACTTC CAGATTTGAA CGATGGTCAG TCGAACGGCA ACTTTTAGAG TATTCGTTTG CCAAACCGAC CGGTGAGGGT GGGGAATTCA TTGAGCACTT GGAGTTAATT CAAATTCAGA TCAGCTTAGA AAGCCGGGCT AATGGCCGTA AGCTAGAAAG CGATAAGATC AGGCTGGAAT TGGCAGCAAT GGGGTTGAAG TCTTATCAAA AACGATTTGG GAAAGACCCT AAAACAAAAA AGCAACGGCG TCCCTGGGTG TATGATGTGG TTCGTTTAGA AAATCCATAA
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Protein sequence | MSMNTDQKLV SVFRNKFDNG LLKDGQPDPK RLPDIDIREF LEGVKNGVWR KPVEYVRAVV DNKAEYDKRK ANIPGVTIWG TFIIRNAGKS DVPSGLMSVD LDHLEESEIQ RVFNLLKSDP YVYAVFRSVG GKGLCVIFRV DYQRWLESFE GIRIYLTEQH GLVMGWDASV KDICRLRFVS YDPDTYVNYK AQLFKKYPRK EKKEVVKLPY THTETDIRYV LDQIHARALD LTGSYEDWFR IGWALISQYG EVARPIFHEV SQYHSSYDSN DCDKKFNYLV ATRPHSIKIA TFYYYCRQAG LDTATPQTKE VQSLAAMAKK QKVSIPSAVD TVLRMTDISE AEARPIIEQV YASTEDFATQ ETIYEQGVRH IQSHFLFYNE VSRRIESPSG SIFGKWEVNE LYNEVLILFD GKLGRQAFES LLFSRKTVPP INPLKQFFSQ HQHNKPTGII SQLASSIETD TGWELDQFAP SYTEYFLRKW LIGLVALAFD NLCDLMLILT GPQNVGKTEF FRRLLPEELR RYFAETKLDR GKDDEILLCE NWIVFLDELS GKSFQDVGLM KNLLSSKVFD LREPYGSTNV KLKRRAALCG SSNPQAILSD PTGNRRIIPI NVLSINREAY NAIDKTDLLM EAYWAYIAGE PYSLSNEDIQ YLNDNTSRFE RWSVERQLLE YSFAKPTGEG GEFIEHLELI QIQISLESRA NGRKLESDKI RLELAAMGLK SYQKRFGKDP KTKKQRRPWV YDVVRLENP
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