Gene Slin_5315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5315 
Symbol 
ID8729080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6479085 
End bp6479780 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content33% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390083 
Protein GI284040153 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.278961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAT TAACTTTTCT ATTTTTCTTT CTTTGTTTTC AAGCTTTAGC ACAATCCAAC 
TTACAGGATG TAATTTATTT AAAGAATGGA TCAGTAATAC GAGGATTAGT CATTGAACAA
GTTCCTAATA TATCAATCAA GCTACGTACG TCGGATGGAA GTGTATTCGT ATATAAAATT
ACAGAAGTAG AGAAAATTAC GAAAGAAGAA AAAATAAGTA CAAGGTCTAA CAATTATGAG
TTTAAAAAAT CTGGATATGT AAACATAGCG GAAATAGGGT ATGCTCCAGG TTTATCTAAT
TCAGAAGGAG CATTTATTTT ATCTGATGTC AACGGCTACA TGATTAACGA AAGTTTTTCT
GCTGGAATTG GGGCTGGTAT CTCTGTCTTT AACTCTGCAA CTTTCATTCC AATATATGCT
GATTTCCGAG CTTATTTGGG AGACAAAATA TCAATCATGA TAGTAGGAGA TATAGGGTAT
GGTTTTCAAA GTGGAAATGC ATATACAAAA TTGAACGGAC TGTTTGTCAA TCCCGCTATT
GGAATACGCA CCAGCATTAC TCAAAAGAAT GTAATTATGT TTTCGCTTGG CTATATGAAG
CAATTCGTTA GTGCAAAAGT CAATTTGCTT GGCTACACAT ATTCGTATAA CGATAGCACC
AACAACCTAT CTCTCAAATT TGGTATTACA TTTTAA
 
Protein sequence
MKLLTFLFFF LCFQALAQSN LQDVIYLKNG SVIRGLVIEQ VPNISIKLRT SDGSVFVYKI 
TEVEKITKEE KISTRSNNYE FKKSGYVNIA EIGYAPGLSN SEGAFILSDV NGYMINESFS
AGIGAGISVF NSATFIPIYA DFRAYLGDKI SIMIVGDIGY GFQSGNAYTK LNGLFVNPAI
GIRTSITQKN VIMFSLGYMK QFVSAKVNLL GYTYSYNDST NNLSLKFGIT F