Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5315 |
Symbol | |
ID | 8729080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6479085 |
End bp | 6479780 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003390083 |
Protein GI | 284040153 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.278961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAT TAACTTTTCT ATTTTTCTTT CTTTGTTTTC AAGCTTTAGC ACAATCCAAC TTACAGGATG TAATTTATTT AAAGAATGGA TCAGTAATAC GAGGATTAGT CATTGAACAA GTTCCTAATA TATCAATCAA GCTACGTACG TCGGATGGAA GTGTATTCGT ATATAAAATT ACAGAAGTAG AGAAAATTAC GAAAGAAGAA AAAATAAGTA CAAGGTCTAA CAATTATGAG TTTAAAAAAT CTGGATATGT AAACATAGCG GAAATAGGGT ATGCTCCAGG TTTATCTAAT TCAGAAGGAG CATTTATTTT ATCTGATGTC AACGGCTACA TGATTAACGA AAGTTTTTCT GCTGGAATTG GGGCTGGTAT CTCTGTCTTT AACTCTGCAA CTTTCATTCC AATATATGCT GATTTCCGAG CTTATTTGGG AGACAAAATA TCAATCATGA TAGTAGGAGA TATAGGGTAT GGTTTTCAAA GTGGAAATGC ATATACAAAA TTGAACGGAC TGTTTGTCAA TCCCGCTATT GGAATACGCA CCAGCATTAC TCAAAAGAAT GTAATTATGT TTTCGCTTGG CTATATGAAG CAATTCGTTA GTGCAAAAGT CAATTTGCTT GGCTACACAT ATTCGTATAA CGATAGCACC AACAACCTAT CTCTCAAATT TGGTATTACA TTTTAA
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Protein sequence | MKLLTFLFFF LCFQALAQSN LQDVIYLKNG SVIRGLVIEQ VPNISIKLRT SDGSVFVYKI TEVEKITKEE KISTRSNNYE FKKSGYVNIA EIGYAPGLSN SEGAFILSDV NGYMINESFS AGIGAGISVF NSATFIPIYA DFRAYLGDKI SIMIVGDIGY GFQSGNAYTK LNGLFVNPAI GIRTSITQKN VIMFSLGYMK QFVSAKVNLL GYTYSYNDST NNLSLKFGIT F
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