| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5234 |
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| Symbol | |
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| ID | 8729000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6388309 |
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| End bp | 6389976 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | ABC transporter related protein |
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| Protein accession | YP_003390004 |
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| Protein GI | 284040074 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.547616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG AAACCATAAT TTTCTCTATG GCAGGCGTGA GTAAAAATAT TCCGCCTAAC
CGACAAATCC TAAAGAACAT ATACCTTTCC TTCTTTTATG GTGCTAAAAT TGGTGTTTTA
GGGCTTAACG GTTCTGGTAA ATCTACTTTA TTACGCATCA TTGCCGGTAT CGATAAAAAT
TATACCGGCG AAGTCGTTTT CTCGCCCGGC TACTCGGTTG GTATGCTGGA ACAGGAGCCG
CAGTTCACGC CCGGCCGCAC GGTTCGCGAA ATTGTTGAAG AGGGCGTTCA GGAAGTGGTT
AATCTGTTGA AAGAATTCGA TGAGATCAAC GAAGCCTTTG GTGACCCCGA TGCCGACTTC
GATAAGCTGA TTGCCCGCCA GGGTGAAGTG CAGGAAAAAA TTGACCATTT CAACGGCTGG
GAACTCGACC AGAAACTGGA ACGGGCTATG GATGCCCTGC GCTGCCCCCC GCCCGACGCG
CTGATCGACA ACTTGTCGGG TGGTGAAAAA CGGCGGGTGG CGCTTTGTCG GCTGCTGCTT
CAGCAACCCG ATGTCCTGCT GCTCGACGAA CCGACCAACC ACCTCGATGC GGAATCCGTA
TTGTGGCTCG AAGAACACCT GCGGTTGTAT TCGGGAACGG TTATTGCCGT GACGCACGAT
CGCTACTTTC TGGATAACGT GGCGGGCTGG ATTCTCGAAC TCGACCGGGG CGAGGGTATC
CCCTGGAAAG GCAACTACTC ATCCTGGCTG GAACAGAAGC AAAATCGCTT AGCCAGGGAG
GAAAAGACGG AGTCGAAGCG GCAGAAGACG CTCCAGCGCG AGCTGGAATG GGTTAAAATG
GCCCCCAAAG CCCGTCAGGC AAAATCGAAG GCCCGCCTGG GCGCCTACGA AAAACTCCTC
AACGAGGACG CTAAACAGCG CGACGATAAG CTCGAAATCT TTATCCCGGC CGGACCACGT
CTGGGTTCGA AAGTGATCGA AGCGGAAGAC GTGGCAAAAG CGTTCGGCGA CCGGCTTTTG
TTTGAACATC TGGGTTTCCG ACTGCCACAG GGTGGTATTG TAGGAATCAT TGGTCCTAAC
GGAGCGGGTA AAACTACGCT CTTCAAACTA ATTACCGGCC GGGAAAAGCC CGATGCGGGT
ACGTTCGATG TAGGCGATAC GGTAAAAGTG GCTTACGTCG ATCAGGAGCA CGACGGTCTT
GATCCAAACA AAACCGTTTT TGAGACAATT TCGGGTGGGA GTGAGTGGAT TATGATGGGC
GGAAAGCAAT CGAACGCCCG CGCGTACGTG AGCCGGTTCA ACTTTGCCGG ATCGGATCAG
GAAAAGAAAA TAGGCATGTT GTCGGGTGGT GAACGTAACC GCGTTCATCT GGCCATGATA
CTGAAAGAAG GGGCCAATCT GTTGCTGCTG GATGAGCCCA CCAACGATTT GGATGTGAAT
ACGCTTCGGG CGCTGGAAGA AGGCCTGGAA AACTTCGCCG GTTGTGCCGT CGTCATCAGC
CACGACCGTT GGTTCCTGGA CCGGATTGCC ACGCACATTC TGGCGTTTGA AGGCGACTCG
CAGGTGTACT GGTTTGAAGG CAACTTCTCG GAATACGAAG AAAATCGACG CAAGCGATTA
GGTACTGAAG CTACTCCTAC CCGTATTAAG TACAAGAAAC TGGCGTAG
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| Protein sequence | MSQETIIFSM AGVSKNIPPN RQILKNIYLS FFYGAKIGVL GLNGSGKSTL LRIIAGIDKN
YTGEVVFSPG YSVGMLEQEP QFTPGRTVRE IVEEGVQEVV NLLKEFDEIN EAFGDPDADF
DKLIARQGEV QEKIDHFNGW ELDQKLERAM DALRCPPPDA LIDNLSGGEK RRVALCRLLL
QQPDVLLLDE PTNHLDAESV LWLEEHLRLY SGTVIAVTHD RYFLDNVAGW ILELDRGEGI
PWKGNYSSWL EQKQNRLARE EKTESKRQKT LQRELEWVKM APKARQAKSK ARLGAYEKLL
NEDAKQRDDK LEIFIPAGPR LGSKVIEAED VAKAFGDRLL FEHLGFRLPQ GGIVGIIGPN
GAGKTTLFKL ITGREKPDAG TFDVGDTVKV AYVDQEHDGL DPNKTVFETI SGGSEWIMMG
GKQSNARAYV SRFNFAGSDQ EKKIGMLSGG ERNRVHLAMI LKEGANLLLL DEPTNDLDVN
TLRALEEGLE NFAGCAVVIS HDRWFLDRIA THILAFEGDS QVYWFEGNFS EYEENRRKRL
GTEATPTRIK YKKLA
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