Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5202 |
Symbol | |
ID | 8728968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6349282 |
End bp | 6350091 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003389973 |
Protein GI | 284040043 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.28697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACG ACAAACTCCG CCAGTTCTTC GTCCTCTTTA GTATTATCAC CCTTATTGTC ATGAACTACC TGTCAAACAT GGCTGCTTTT GGGGGGAAGA CAAATAAGGA AATTTCCGAC AAATACCATA CGCTTATAAC GCCCGCCGGG TATGCCTTTG CCATCTGGGG GATCATATTT TTAGGATTGC TGGCCTTTGG CATCTATCAG GGACTTGGCT CACAGCGGAC GAACCCGCGC TTCCGGGCCA TCGGCTGGTG GGTGGCGCTG AACGCGTTCG GTAATGCCAT CTGGAGCCCG CTTTTCAACA ACGAAAAGAT AGGTATAGCC TTGATCGTTA TTCTGGTGAT GCTGTTGTCG TTGGTAGTGA TCGAGCAGCG CCTGCTGGAA CGGCGGCACG TTCCGATCAT CGATGCCGAC CCCGATGTAA CCCTGCCGGA GTCACCGGCT TCGGGAACAG AAACATGGGT GGCCCGTATT CCTTTCTCGA TTTACTTTGG CTGGCTCACC GTCGCGACGA TTCTGAACGT AACGGTTTTC CTGAAATCGA CAGAATTCAG CCTGATGGGG CTAAGTGAGC AGACCTGGGC TATCGCCATT CTGATCGTTG GCCTGGTTGT AGGGGCAATT GTCTTTAACC GCTTTCGAAG TGTGGCCTAT ATTCTGGTAT TTGCCTGGGC GTATGCCGCC ATTGCGGTCG AGCAGGAGGG CGTTGGGCAG ATACCGTTGG TGGCCGGAGC GGGTGCCATT GTGGCCGTAG TGCTGGCCAT TATTGGGCTG ATTTCGAAGA AAACGCCGGT ATATAGTTAG
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Protein sequence | MQNDKLRQFF VLFSIITLIV MNYLSNMAAF GGKTNKEISD KYHTLITPAG YAFAIWGIIF LGLLAFGIYQ GLGSQRTNPR FRAIGWWVAL NAFGNAIWSP LFNNEKIGIA LIVILVMLLS LVVIEQRLLE RRHVPIIDAD PDVTLPESPA SGTETWVARI PFSIYFGWLT VATILNVTVF LKSTEFSLMG LSEQTWAIAI LIVGLVVGAI VFNRFRSVAY ILVFAWAYAA IAVEQEGVGQ IPLVAGAGAI VAVVLAIIGL ISKKTPVYS
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