Gene Slin_5202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5202 
Symbol 
ID8728968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6349282 
End bp6350091 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389973 
Protein GI284040043 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.28697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACG ACAAACTCCG CCAGTTCTTC GTCCTCTTTA GTATTATCAC CCTTATTGTC 
ATGAACTACC TGTCAAACAT GGCTGCTTTT GGGGGGAAGA CAAATAAGGA AATTTCCGAC
AAATACCATA CGCTTATAAC GCCCGCCGGG TATGCCTTTG CCATCTGGGG GATCATATTT
TTAGGATTGC TGGCCTTTGG CATCTATCAG GGACTTGGCT CACAGCGGAC GAACCCGCGC
TTCCGGGCCA TCGGCTGGTG GGTGGCGCTG AACGCGTTCG GTAATGCCAT CTGGAGCCCG
CTTTTCAACA ACGAAAAGAT AGGTATAGCC TTGATCGTTA TTCTGGTGAT GCTGTTGTCG
TTGGTAGTGA TCGAGCAGCG CCTGCTGGAA CGGCGGCACG TTCCGATCAT CGATGCCGAC
CCCGATGTAA CCCTGCCGGA GTCACCGGCT TCGGGAACAG AAACATGGGT GGCCCGTATT
CCTTTCTCGA TTTACTTTGG CTGGCTCACC GTCGCGACGA TTCTGAACGT AACGGTTTTC
CTGAAATCGA CAGAATTCAG CCTGATGGGG CTAAGTGAGC AGACCTGGGC TATCGCCATT
CTGATCGTTG GCCTGGTTGT AGGGGCAATT GTCTTTAACC GCTTTCGAAG TGTGGCCTAT
ATTCTGGTAT TTGCCTGGGC GTATGCCGCC ATTGCGGTCG AGCAGGAGGG CGTTGGGCAG
ATACCGTTGG TGGCCGGAGC GGGTGCCATT GTGGCCGTAG TGCTGGCCAT TATTGGGCTG
ATTTCGAAGA AAACGCCGGT ATATAGTTAG
 
Protein sequence
MQNDKLRQFF VLFSIITLIV MNYLSNMAAF GGKTNKEISD KYHTLITPAG YAFAIWGIIF 
LGLLAFGIYQ GLGSQRTNPR FRAIGWWVAL NAFGNAIWSP LFNNEKIGIA LIVILVMLLS
LVVIEQRLLE RRHVPIIDAD PDVTLPESPA SGTETWVARI PFSIYFGWLT VATILNVTVF
LKSTEFSLMG LSEQTWAIAI LIVGLVVGAI VFNRFRSVAY ILVFAWAYAA IAVEQEGVGQ
IPLVAGAGAI VAVVLAIIGL ISKKTPVYS