Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5198 |
Symbol | |
ID | 8728964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6343827 |
End bp | 6344927 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003389969 |
Protein GI | 284040039 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.197197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAC TTCGCATCCT GATTCCTCTT CTGCTGTTGG TTGCCGTGTT CGTCTTTTTC GGTGTATTGC CCCGAATGCG TAATACGCAG GAACTGAAAG CGGCCGTTTC GGAGGAAAAG AGCCGTGACC CCATCGTGAA CGCGGTGTCC CTGAAACACT CGTCCGATAC AACCGGGCTT ACTTTGCCCG GCCAGATTCA GCCATTCCGG CAAACGCCCC TCTACGCCCG TACGCAGGGC TTTCTGCGTC GGTGGTACGT TGACATCGGC GGACAGGTGA AACAGGGCCA ATTACTAGCT ACCATCGACG TGCCCGAACT GGACCAGGAT ATTGCCCGCG CCAAAGCCGA TCTGCAACTG GCGAAAATTA ACCTCGAACG GCTGCAAAGT GTTGAGTTGC CCGGCGCCAT TGCCCGGCAG GATGTTGATA CGCGCCGGTC GGCGGTAACG GTGGCAGAGG CTAACGTGGG CCGATTACAG GCGCTGAAAA ACTTACAGCA GATCCGGGCA CCCTTCAGCG GTATCATCAC CAGTCGGACG GCCGAAAACG GAACACTGGT ATCGCCGGGA ACTGGGCAAC CCTTGTTCAC CCTCTCGGAA GTGGGCTCGC TGCGGGTATT TGTCGACGTG CCGCAAACGT ATTACCAATA CATGAAGATC GGGATGCCCG CTACGGTTAC TATTCCTGAG CTGAAAAATC AGACCTTCCA GGGAAAAGTT ATGCATACGT CGGGGGCGTT ACGGAGCGAT TCCCGAACGC TGCTGGCCGA GGTCGTGATT CCTAACGCTA AACAAAGCTT ACCCGCCGGG CTGTATAGCC TGGTAAAGTT TGATATGATT GCCGCCCAGG CTCCCGTACT GATTCCGGCC AATGCATTGC AGATAACACC CGATGGACCG CGGGTGGTCG TTGTCGATGA TGGTCAGCGT GTTCATTTTG TGCCCATTAA ACTAGGGCGC GATTATGGCA CAACGCTCGA AGCCGTAAGT GGTCTGACCG GGCAGGAGTT AGTTGTAACC AATCCAAACG ACCGTCTGCG CGATGGTCAA AAAGTAAGAT TTCGGAAGAC CCCAGCCGAA AAAACCATAG TCCAACGATG A
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Protein sequence | MKALRILIPL LLLVAVFVFF GVLPRMRNTQ ELKAAVSEEK SRDPIVNAVS LKHSSDTTGL TLPGQIQPFR QTPLYARTQG FLRRWYVDIG GQVKQGQLLA TIDVPELDQD IARAKADLQL AKINLERLQS VELPGAIARQ DVDTRRSAVT VAEANVGRLQ ALKNLQQIRA PFSGIITSRT AENGTLVSPG TGQPLFTLSE VGSLRVFVDV PQTYYQYMKI GMPATVTIPE LKNQTFQGKV MHTSGALRSD SRTLLAEVVI PNAKQSLPAG LYSLVKFDMI AAQAPVLIPA NALQITPDGP RVVVVDDGQR VHFVPIKLGR DYGTTLEAVS GLTGQELVVT NPNDRLRDGQ KVRFRKTPAE KTIVQR
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