Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5187 |
Symbol | |
ID | 8728953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6331901 |
End bp | 6334153 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | peptidase M56 BlaR1 |
Protein accession | YP_003389958 |
Protein GI | 284040028 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.336784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTACA TCCATCTCCT CTCCAGCCCG GTTACCGAGG CCCTTGGCTG GACATTACTC CACGCCGTTT GGCAGGGGTT CTCGCTGGTA CTACCCGTTG CGATTGTCCT GCACCTGCTG CGCCATCGGT CGAGTGGGTT GCGCTACCGG GTGGGCACAT TAACGCTACT AGCTCAGTTG CTGATGTCAG CGGCTACGTT TTCCCTGTAT TACAAACCTC TGGCTGGTAG CGTCTCGCCC AAGTCCATGA CAATGGCGAT GCAAACGATG CCGATTAGCT GGCAGACGAT GACCCAAACG CTGCCCTGGC ATCAGCAGGT ACAACTGTTT CTGGAGAACC ACCTTAGCCA GTTTGTCTTG ATTTATCTGA TTGGGGTGGC CCTGTTCGGA GTACGGCTGG CAGGGGGCTG GCTCTACCTG CAACGGCTCA CAAAAACGGC CTCCGAACCC GCTTCTACGG TTTGGCTGCA ACTCACCAAC CGTCTTCGGT CAACGCTGGC GATCCCGGGC TTGGTGCAGG TTCGGGAATC AGCCCGGATT GGCGTACCAA TGGTGGTGGG TGTACTAAAA CCGGTTTTAC TGTTGCCGGT CTCGCTGGCC TCCAACCTGA CCACACGCGA AATAGAAGCG ATCCTGGCGC ATGAGTTGGC ACACATCAAA CGGCATGATT ACGCGGTCAA TCTGCTGCAA TCGGTTATTG AAGTGCTGTA TTTCTTCCAT CCGGCGCTGT GGTGGCTATC GGCGCGGGTA CGGGAAGAAC GCGAACACTG CTGCGATGAC CTGGCCGTAC AGGCTTGCGG TGGCGACGGG CGAATTCTAG CGCAGGCGTT GGCGCATGTC GAAGAACTTC GGTTGCTTCA GCTCAATGCG GCCCCAACGC TGGCGATGGC TTTTGCCAGC AAGCGACAGC ATTTACTGCA TCGGGTTCGG CGGATGCTGG GTGTGCCCAC GCGCCCGTTC GTTTCCAACG GTAGTCTGGC AGGGTTGACA CTGGCGACCC TCCTGCTGAT GAGCGTGTCC GTCTACGCGG TTCAGCAACA GGAAAAGCCG AAGTCCAAAC TGAAGAGTAG CCAACCGACG CCAACCCGAA AACATAAAGC AGGAAATGGT ACTGAGTTTA GCATTACCGA TAATCGGAAA GTGGACTACA TTATCTGGAA AGGCAAGAAA TTACCTGCCA AACGGGTAGC CCAGTTACAG CACCAGCTCG ATCAGGTGAT GGCGGGCCAG CTAAACCTCG ACGATGTAAA ACAGCCCGAC CGGGATATTC TGCTGACCAT CATCGAAACG AATTACGGAC ACCAAAAAGG AATGGAAGCG CTGGCGGAGG GATTAAGCCA TATTGACTAC AGCAACATTG TGGCATCGGC GCTAACGAAC ATCCCACTCA GCCCCGATGG TACCGTGGAA GGGCTGGCCA GGGTTAATTA CGATTCGATC ATCAACAATG CATTTGCGTC GTTACCGGCC CTGCCCGTTC TACCCGATTC ACTTGGCAAG TTCAATCAGC TGAATCAGCG GTTGCTTGAC AATGATACGC TTCCCAAAGA ATTTCAGAAT AAATTTCTGG AACTTAAGCG CAAGTACGAT CAAGTGGCGA CGCAGTTGAC GGAGCAAGAA AAGGCTATGG AAAGCTATTC GGCCCAAATG AAGGAGCCGA TAAAGCAGTG GCGACGTATG GAACTGGAGC AACGCAAATT GCAGGAACAG ATGGCTTATA TGCAGAAACA AGCTTCCCGA GCCGACTTCC GTACCATCAA TGATGCGCTT CTGGCGGAAA TCGCAACCGC CGAAAGCAAC CTGTCTGAAC TTCGCAAACA GATGAATGAG CTAAAACTTA GTAAGATTAG GCCGCACTCG GACAAGATGT CCAAAGCGTT TAAACGGCTG GAAAGATTGA GGGATTCTAT TCGCATCAGT GAAGGCGACC TATTAAATCC ACCATTCGAA GATCTCAACC TATCTGAACC ATCCCCATCG GAAGATAGAA TGATCGAGTA CGAGTATGAC TTACGAAAGG TTCGGCCCCG GCGCATTAGT CCGGCCAGAC CTCCACGGGG AGTTATCGCG CCCGCAGCAC CTGCCGAGCC AATAGCACCA TTGGTCAACG CACCCGCCCC GCCACCACCG GCCAGAGCCG TTAAACCGTT ACGTGGCCGG GCAACGCTAC CCGCTGTTCC AAAACCGCCG AAACCAGCCA AAGCGCCCAA AGCAGAACTG CCTGAGGTAC CCGAATTACC CGAAAAGCCG TAA
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Protein sequence | MNYIHLLSSP VTEALGWTLL HAVWQGFSLV LPVAIVLHLL RHRSSGLRYR VGTLTLLAQL LMSAATFSLY YKPLAGSVSP KSMTMAMQTM PISWQTMTQT LPWHQQVQLF LENHLSQFVL IYLIGVALFG VRLAGGWLYL QRLTKTASEP ASTVWLQLTN RLRSTLAIPG LVQVRESARI GVPMVVGVLK PVLLLPVSLA SNLTTREIEA ILAHELAHIK RHDYAVNLLQ SVIEVLYFFH PALWWLSARV REEREHCCDD LAVQACGGDG RILAQALAHV EELRLLQLNA APTLAMAFAS KRQHLLHRVR RMLGVPTRPF VSNGSLAGLT LATLLLMSVS VYAVQQQEKP KSKLKSSQPT PTRKHKAGNG TEFSITDNRK VDYIIWKGKK LPAKRVAQLQ HQLDQVMAGQ LNLDDVKQPD RDILLTIIET NYGHQKGMEA LAEGLSHIDY SNIVASALTN IPLSPDGTVE GLARVNYDSI INNAFASLPA LPVLPDSLGK FNQLNQRLLD NDTLPKEFQN KFLELKRKYD QVATQLTEQE KAMESYSAQM KEPIKQWRRM ELEQRKLQEQ MAYMQKQASR ADFRTINDAL LAEIATAESN LSELRKQMNE LKLSKIRPHS DKMSKAFKRL ERLRDSIRIS EGDLLNPPFE DLNLSEPSPS EDRMIEYEYD LRKVRPRRIS PARPPRGVIA PAAPAEPIAP LVNAPAPPPP ARAVKPLRGR ATLPAVPKPP KPAKAPKAEL PEVPELPEKP
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