Gene Slin_5154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5154 
Symbol 
ID8728920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6293296 
End bp6293877 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content50% 
IMG OID 
ProductSporulation domain protein 
Protein accessionYP_003389925 
Protein GI284039995 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000656919 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.256821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGTG AAATTGGCGG TGTACTTATT TTAGGCTTGC TGGTAATGAC AGGCTGTGCC 
AGCAACCGTA CCGTTACCTC GGGCCGGGCT GCGGTTGATT ACAATAGTTA TAACGAAGAT
TTAGCGTCGG TACGCCCTGT TTATCGGCCT ATGCCAGTCG CTTCCGGTAA TACAACCGCA
CCAACAACAT CTACAACGTC GGCACCGGCT GCCCGTAAAC CAGAAAGCCG CAAACCCGCT
GCGCCTATTG AGGCCATGCA TATTAACCGG CGGCTCGATA TGGTACTCGA TACCATTGCC
ACGCAGAATC GATCGATACG TTACGCACCC GGCTTTCGCA TTCAGGTATA CGTAGGCACG
CAACGCCAGG AAGTGGATGC CATCCGGCAG CTTATCACGC AGAATTTTCC CGAGCTGAAT
CCCTATCTGA GTTATAACCA GCCTACCTAC CGGCTGAAAA TTGGTGACTT CATGCGTCGT
ATGGATGCCG AGCGCTATTA TTCTTTAGTT AAACGGATGA TTGAGTCTGC TCAACTTCAA
GCGGATAAAG TTGACATACG CCGAAGCCTG TCGATAAAAT AA
 
Protein sequence
MKGEIGGVLI LGLLVMTGCA SNRTVTSGRA AVDYNSYNED LASVRPVYRP MPVASGNTTA 
PTTSTTSAPA ARKPESRKPA APIEAMHINR RLDMVLDTIA TQNRSIRYAP GFRIQVYVGT
QRQEVDAIRQ LITQNFPELN PYLSYNQPTY RLKIGDFMRR MDAERYYSLV KRMIESAQLQ
ADKVDIRRSL SIK