Gene Slin_5134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5134 
Symbol 
ID8728900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6275818 
End bp6276660 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content49% 
IMG OID 
ProductAbortive infection protein 
Protein accessionYP_003389905 
Protein GI284039975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATA GTGATACCCT TCCATCCGAA GAACATATTC AACCGATCCT CCCTTCTGAA 
AACGCTTATC CAACCCTTAC AGAAATTTGG ATATTGGTGG GTGTATTTAT TCTGGCGCAG
GTACCCGCTG CGTTGCCCAT GATTGGCCTT AAAGCAGCCG CCGATGCGTT TGAACTGCCC
TTTCTGGATA CCATCGGGCA AACATTGGCT TATGCCCTCG GCATGATGCT CACCATCTGG
TACGCGTTCC GTAAGCGAGG CAGCCGTGCG TTATCATTTG CGTCGGTTCC CGTTTCGGCC
TATCTGGTTT CGGCGGTCGG GTTAATTGCG ATGGGCGTGC TGGCCGAGCC TATTGTGAGT
GCTATTCCCA TGCCCGATGC CATGCAAGAG ATGATTAAAA AAATGTTCAA CAAGAACATG
GTTGTATCGG CAGTAATTGC CGCGCCAGTC TTAGAGGAGA TTTTGTTCCG GGGTATTATC
CTGGATGGTT TTCTGAAAAA CTACCGTCCT GCCAAAGCTA TTATCTGGTC GGGGGTGATT
TTTGGCCTTA TTCACCTCAT TCCTGCTCAG GCGCTGAACG CGGCTTTCAT AGGTATTGCG
CTCGGCTGGT TGTATTATCG TACCCGTTCG CTTACACTCT GTATGTTTTT ACATTTTGTG
AACAATGGCC TCAGTTCGCT CTCGCTGCTA ACTGATGAAG CACTGGACAT GAGCCAAAAC
CAGACCCGCG AGTGGATTGG CAGCGATCTG ATGTATGGCA CTTTGCTGAT TGGTTGTTTG
CTGACGTGCC TGGCTAGCTA TAGACACCTG AACCGGATTT TACCAACTGC ACAGATTAAT
TAG
 
Protein sequence
MTNSDTLPSE EHIQPILPSE NAYPTLTEIW ILVGVFILAQ VPAALPMIGL KAAADAFELP 
FLDTIGQTLA YALGMMLTIW YAFRKRGSRA LSFASVPVSA YLVSAVGLIA MGVLAEPIVS
AIPMPDAMQE MIKKMFNKNM VVSAVIAAPV LEEILFRGII LDGFLKNYRP AKAIIWSGVI
FGLIHLIPAQ ALNAAFIGIA LGWLYYRTRS LTLCMFLHFV NNGLSSLSLL TDEALDMSQN
QTREWIGSDL MYGTLLIGCL LTCLASYRHL NRILPTAQIN