Gene Slin_5097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5097 
Symbol 
ID8728863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6234727 
End bp6236910 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF303 acetylesterase putative 
Protein accessionYP_003389871 
Protein GI284039941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATT GTTACTTATT AAAGCATCTA CTTGTCATTA GCTTGCTAGC TACTGGTACA 
CACCTGTCAG CACAGACAAC GAATCAGGTC TTAAAAATTA CCTATCCTGA AAGCCGGGCG
ATTTTTCAAC GCGAGAATGA TAATACCAGT ACTATTTACT TATCGGGAAG CTTATATCAA
CCCGTCGACA GTGTTCAGGC TCGCCTGCAG GTAGAAGTAG CTGGGCAGGG CCTCAACACA
AACTGGGTGA CCATTCAACG GAATCCACAG GGCGGAATTT TTCAGGGTTC GATACGAGCC
AGAGGTGGTT GGTACAGACT GGAAGTACAG GCGTTCGTTG GCGGTGTTGC TACCGCAAGT
GACGTTGTCC GTAAGGTTGG TATCGGCGAG GTATTCATTA TAACGGGCCA GTCGAACGCG
CAGGGTTTCC AGAACTACGG AGCGGTAGGC GCCGTGGATG ACCGGGTAAA CTGCGTTGCC
TACGACAATA CCAAAGCTAA CTCACTGAGC GATCCTCCAG CTCCTACGTT TCAGCAATTA
ACCGCCACAT CGTTGATTGG CCCGCGAGGA CAGAGCGCCT GGTGTTGGGG GTACCTGGGC
GATTTGTTAG TTAAACAGTA CAATGTTCCT ATATTGTTTA TCAATACCGC CTGGGTGGGA
ACAACCATTC AAAACTGGAC GGAAAGCTCC CTTGGAAAAG TTACCAAGAA CCTTTTCGCT
CTGGGCACCC CCGACGAAAA CTTTCCGGCT GGAATGCCAT ACGGAAACCT TATCACCGCT
CTTCGCTATT ACTGCTCTCT ACAGGGATTG CGGGCTGTGT TATGGCAACA GGGCGAATTT
GACAACTTCC CGCTGCGCTC TACCCGTCAG GACTACGCCA ATAACATGCA GTTCTTGGTC
AATAAAACGC GTAATGATAC AGATCGGTAT CCGGCCTGGG TATTGGCCCG ATCGTCTTAT
AACAATGGCA TGGTAAGTCA GGACATCATT CAGGCTCAGA ATGATGTGAT TAACACCTAC
AACAACAACG TATTTGCGGG GCCCTTTACC GACAACATCC AGATTCCACG CTTTGACCCC
GTTCACTTTG GTAACAGAGC CACGAACAAT CCGGGAGATA AAGGCCTGAA TGATTTGGGA
CAAGCCTGGT TTGAGAGCCT TAACGCTGTT TTCTTTTCAA GCTCGCGTCC ACTGCCTCCC
CTGCCTCAGC CAACTATCGC GGTGGTCTGT TCACCAGCGG CAAATAGTAT CAATCTGACC
CTCCCCAGTT TATTTAAATC GTATTCCTGG AGTTCGGGAC AAACCACGCA GAACATTACA
GTTACACAAC CAGGGGTTTA CCGGGCCACT TTAAAGGATG CATATGGAAA CACGTTTCTA
TCGCCGGCAC TTGACCTGCA AGGGCCAATT CAACCGGCAA CACCAACTAT TTCGCTGGCC
AGCCAGCCCG GTAAAGTAGT CGATTTTCAA CAGCAGGTTT GTGCAGACTC AACACTGTCA
TTGCTGGCTA ACACATCGGC CAACAGCACA GGCGTATGGA GTTATAGTAC CACAACGTCC
GTTACCAAAG CCATCAAATT AAGCACATCG GGATCGTATA CCCTCCAGGC CGTGAACGTT
TATGGCTGTA AATCCGCACA GCCCGCAACG GTCAATTTAA CGGTTCGCCC CAAAGTACCG
ACGCCCACCA TCGAGCAGAT CGGTGCTTAT AGCCTGCAAG CCGTGTTGCC AAGGCCAACA
GGAGGCCAGC CCGACTTATT CGACTGGCGA CGCGCTGCTG GCGAGGTGAT CCCCCAAACC
GGTGCAGTGG TGAAGGTAAT CGTTTCCGAG AACTACTCGG CGCGTACCAA AACAACTTTT
ACCCTCAATA GCGGGTCTGC CCTAACGTGC TTTTCCGACT TTAGTACGCC CAAAGCCTTT
ACATTTGACC GATCTAACGG AGGGGTAAGT ATATACCCAA ATCCATCTTC CAACGGTATG
GTCACCATAG AAACCATTGA AGATTTGGTT GATGCCAGCG TCGACGTCTT TTCGCTGGGT
GGGCAGAAGC TGTTTTCATC TCAGGTTCCT TCTTTTAACG AACGAAAGGC CATTGACTTG
ACAGGCCTAT CGCAGGGCGT TTATCTGGTG CGGGTACGTT CAGCCGGTTT TGATGTCTCC
AGACGTATTA TTATAAACCG ATAG
 
Protein sequence
MKNCYLLKHL LVISLLATGT HLSAQTTNQV LKITYPESRA IFQRENDNTS TIYLSGSLYQ 
PVDSVQARLQ VEVAGQGLNT NWVTIQRNPQ GGIFQGSIRA RGGWYRLEVQ AFVGGVATAS
DVVRKVGIGE VFIITGQSNA QGFQNYGAVG AVDDRVNCVA YDNTKANSLS DPPAPTFQQL
TATSLIGPRG QSAWCWGYLG DLLVKQYNVP ILFINTAWVG TTIQNWTESS LGKVTKNLFA
LGTPDENFPA GMPYGNLITA LRYYCSLQGL RAVLWQQGEF DNFPLRSTRQ DYANNMQFLV
NKTRNDTDRY PAWVLARSSY NNGMVSQDII QAQNDVINTY NNNVFAGPFT DNIQIPRFDP
VHFGNRATNN PGDKGLNDLG QAWFESLNAV FFSSSRPLPP LPQPTIAVVC SPAANSINLT
LPSLFKSYSW SSGQTTQNIT VTQPGVYRAT LKDAYGNTFL SPALDLQGPI QPATPTISLA
SQPGKVVDFQ QQVCADSTLS LLANTSANST GVWSYSTTTS VTKAIKLSTS GSYTLQAVNV
YGCKSAQPAT VNLTVRPKVP TPTIEQIGAY SLQAVLPRPT GGQPDLFDWR RAAGEVIPQT
GAVVKVIVSE NYSARTKTTF TLNSGSALTC FSDFSTPKAF TFDRSNGGVS IYPNPSSNGM
VTIETIEDLV DASVDVFSLG GQKLFSSQVP SFNERKAIDL TGLSQGVYLV RVRSAGFDVS
RRIIINR