Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5078 |
Symbol | |
ID | 8728843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6205442 |
End bp | 6211021 |
Gene Length | 5580 bp |
Protein Length | 1859 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | alpha-2-macroglobulin domain protein |
Protein accession | YP_003389852 |
Protein GI | 284039922 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.364401 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACACCC GCCCGTACCT GACCAGCCTG CTGACCGGCC TCCTTTTCGT GTTCGCGTTT TCCCATTGTT CACGCCTGTC TTTCAATGAC GTATCCGTAG TGGGCCGCAA TTTTAGTGAT GAAGTCCAGC AGACGCAGAA TTTGACGTTT ACCTTCAATA AAAACATTGG CCCAGCCAGT CACCTCGATG AGTGGGACTC GACCCAATAC GTGCGTTTCA TTCCGGCCGT TCGCGGCAAA TACAAGTGGA CGGCTCCCAA CGAGCTTGTC TTTTCGCCCG CCCGCGCTTT CGATCAGGCC ACCGACTACC GCGCCGAATT GACGGATAAC CTGGTGCGTT ACGCCGACAA AAAAGACCTG AAAGTATCGG ACGAGGTAAT TGCGTTCCAC ACGCCCTATT TGCAGCTAAC CACCGTCGAA AACTGGTGGT CACGAGATCG GGCAACCGGG CAGCCCGTAG CCCGAACCCG GCTTAACTTC AATTACCCGG TATCGTCGAC AGAAGTAATT GAAAAACTGA CCGTTGCCGC CGATGACAAG GCACTTACGG TTCAGAGCGC CCCCAGCGAT GCGGCTAATT CCGTAGCATT GACGCTCACC AATGCCCCGT CCCTGAAGAA CGAGCAGCCG CTGTCGCTAA AAATAGACAA GGGAGTGAAA GTCCCGAAAA CTGCTTTCGT TAGTAAGGAT GCCATCAACG AAACCAGTAC ACTCCCCTCC CGCTATGCCG TTGACATAGC CGATGTACAG ACAACGTTCG AGAATAACCG GGGCGTCATA AAAGTTATTA CCACTCAGGA ACTTCAGCCG CAGTCCGGCG GGGCAGCAGG TGATTTGAGC GCCTATTTCA CGATTCAGCC ATCGGTAGAA ACAACCGCTG AACTAACCGA GAATGGGTTC ATTATCCGGG GTAATTTCAA CGAGGCCGAT ACCTATGTAC TGACCCTCAC CGACCAGATT CGCGGGGTGT TGGGCAACAA ACTGGCCGAA CCCGTAACGC GCGATCTGTT TTTCGGGAAG ATGCCCGCCA GTATTCAGTT TGCCAACAAA AAGGCGCTGT ATTTATCCTC GAAAGGTGCG CGCAACGTTG GCCTTAACAT TGTTAACGTC CCGAAAGTAC AGGTCAAGAT CGTAAAAGTA TACGAGAACA ACCTCCTGAA TTACCTGCGG TCGAACCGGT ACGAAGAGTA TACCGAAAAG GCCAATGGCG AATGGGGGCC ATCGGGCTCG TTCAATTACA GTGCCGATGA AACCGGCGAG TTGAGCGATG TGCTCGTCGA CAAAACCGTT GAAACGACCG ATCTGCCTAA AGTTCGGGGC GTATCGGCCC TGAATCTGGC CTTGCCGGAT CAAAACAACA ACTTCCGGGA GCATCCACTC CGGGGTGTCT ATCTGGTGTC GGTTAACTCA AAAGACGAAG CTTATTTACA GGCTTCTCAA CTGGTTTCCG TATCGGATAT TGGCCTGATT GCGCGGCATA CGAACGATGA AGTGCTGGTT TGGGCGAACT CCATCCGCAC CGGTGAGCCC CTGCAAAGTG TGGAAGTCAC ACTGATCAGC AGCAACAACC AATCCGTGTA CACCCTCAAA ACGGATGGTA CGGGCTTTGT AAAGTTTGAC AAGGTAAGCG AGAAAGCGCC GGGCTTTAAA ATAGCGTTGT TAACCGCCCG CACAACCACC CCAGCTACAG CCAGCCAATC GAATCAGGAC GACTTTAACT TCCTGTTTTT GCCCGATACG CAGGTCGAAA CATCCCGTTT CGAGGTAGAC GGCAAACGCG ATAATCCGTC TGGCTTCGAT GCCTTCGTCT ATGGCGACCG GGACATCTAC CGCCCCGGCG ATACGATTCA TTTTAACACC ATTATTCGCT CGCAAACCTG GCAAAGCGTT GGCCAGATTC CTATTGTGGT TCGGGTGCTG ATGCCCAATG GGCGCGAATT TCGGGCGTTT CGCAAAACGA CAGACGCTCA GGGATCGGTC ACGACCGATG TGCCCCTCGA CCCGGCTGCG GTAACGGGTT CTTACACCGT CGAAATCCTC AACGCCAACA ATGTGCTGCT GGCATCGGAA TCGATCAGCG TGGAGGAATT CGTCCCCGAC CGCATCAAAG TCAACGTACT CACCGACCAG ACGAGTTACA AAGCAGGCCA GACAATTACC CTGTCGGCTA CGGCCATGAA CCTGTTCGGG CCACCCGCTT CCGACCGGGC TTATGAAATG GAACTCCAGC TAAAACGAAA GGCCTTTGCG CCCAAAGGTT TCGGCGAGTA TGCGTTCGAC ATGACCAATG GAACCTCGCC GGGGAGTGAG CCCGCCAAAA CGGATCTGTT CCCCAAAGAA CTCCGGCAGG GACGCACCAA CGCCAACGGG CAGGCTACCG AACGCTTCCC GATTTCTCAG CTTTATCAGG ACATCGGTCT GTTGGAAGCG AAGATGTTCG TGACTGTCTT CGATGAAAAC GGCCGACCGG TCAACCGGCT CCGGCGGCTG GATATTCTAA CGCAGGACAC CTTCTACGGT CTGCGCTTAC CCGACCGATA CGTAGCCACC AACGCCCCGC TCGCCGTCGA TCTTGTGGCT CTCGACCCGG CCGGGCAACT GCGGGCGTCG GCCTCGGCGA TTGTTGAGGT GATCAGGTTC GATTACCAGA CGGTTATCGA AAAAGCCGAC AACAACGTGA AGTACACCAC GAAACGACGG GAAAAATCGG TTTATACTAA CACCCTGCTG TTCAAAGGTG GCAAAGCGTC GTTCCGCTAC GTGCCTACAG TTTCAGGAGA ATACGAAGTC CGCGTTCGTC GGCCCGATGC GGCTGCGGAC AAATACGCGG CTACGGGTTT CTATGCCTAT GGTTTCGGCA GCACCTCGGC CTCCTCGTTC GAGGTCAGTC AGGAAGGGCA GGTACTCATT GAAACGGGAC AGTCTACCGT ACAAACCGGC GATAAGGTTA AGGTGCTGTT CAAAGCACCT TTCGACGGCA GGCTGCTCGT CACCGTAGAG CGCAACCACG TTCTGGAACA GCACTGGCTT ACAACCACCA ATAAATCGGC CGAGTGGAGC TTTTCCGCTG GTGTCGATCA CCTGCCAAAC GTTTACGTGA CGGCTACCCT GATTCGGGCC ATCGACGCAA CGAACTTACC GCTCACCGTA GCGCATGGCT TTACCTCAAT TGCCGTCCAG GATCGGTACA CCCGGTTGCC CGTAACCCTT ACCGCCGTTA CGCAGTCGCG CTCAAAAACG AAGCAAACGA TTCGTGTTAA AACAGCCGGT AGTGCTCAGG TAACGATTGC CGTTGTGGAC GAAGGAATTC TCCAGTTAAA AAACTTTAAA ACACCCGATC CGCATGGGTT CTTTTACCAG AAACGCGCCC TCGAAGTGAC CAGCCATGAT TTGTACGCCC TGCTGTATCC CGAGCTTTCA CTGCAATCGA AGTCGAGCGT GGGGGGCGAC GGCTACGACC TGGAACGGCG CGTAAACCCG CTTAGTAACG GACGGGTACG CCTGGTGGCC CTTTGGAGCG GGATTAAGAA AGCGGATTCC GACGGCAACG TGGAGTTCCC GATTGACATT CCACAGTTTT CGGGCGATCT GCGCGTAATG GCCGTTGCCT ACAAAAACGA GGCATTCGGG TCGGCCAACA GCAATATAAA AGTTGCTGAC CCCATCGTGA TCAGTACGGG CGTACCGCGT TTCCTTACTC CCGGCGACCG GGTTGAGCTA CCCGTCAACC TGAGCAACAC GACCAAACAG GTAGCGACCG TTACCGCCCG TTTGAATCTG ACGGGGCCAC TGGCAGCGGA TAGCATCAGT ACGCAAAAAC TCACCATTCA ACCCGGTCGA GAAAGCCGGG CTATCTTCCG GGTAGCCGCC CAACAGGCCA TTGGTGCGGG AGCCATCACG GTAACGGTCA ATGGCCTGAA CGAAACCTTC ACCGAGAAAA CCGAAATTAC CGTTCGTCCG GCGGCATCCC TGCAAAAAAC GACCCTGTCG GGCGCGGTTG CTGGTGGCAA AACACAGGCG ATTCGGCTGG CGGGTGGTTT TTTGCCCGGA ACAGCGCGGG CCAGCGTAAC CCTGAGCCGG TCGCCGGTGG CGCAGTATGG TCGGGAGTTA TCCTTCCTGC TGGGGTATCC GCACGGGTGT CTGGAGCAAA CGATTTCGAA AGCATTTCCC CAGCTGTACT TCGCTGATCT GGCCAAACAG GTATCGGCTA GTACCTACTT CGTCCGAGCC GGCGAAAGCG ACCTGAACCC GGCCACGAAT ATTAGGCAGG CGGTTCAGCA GGTAGAAGGC TTACAGGCAC AAAACGGCGG CTTTACGATG TGGCCCGGCA TGGCGGCCGT GTCCGGAAAA TCCAACGTAG ATGCGTGGGC TACGGCTTAT GCCGTACATT TTCTGGCCGA AGCGCAGGAA GCCGGGTACG AAGTTCGGTC ATCGATACTC AGTTCAGCGA TTGATTACCT GACAACGCTC ACCAACAGCC CCGCTACCGA AAACGCTGTT ACGTTCGATG AAGCCGGTGG ACGAACCGTG AAGCAGGTGG CAAGCCGCAC AACGATCTAT GCCTTGTACG CCCTGTCTGT AGCCGGTAAA CCGAACCGCT CGGCCATGAA TTATTACAAG CAGAACGCCG GTTTGCTGAC GAACGATAGT CGCTACCTCC TAGCTTCGAC GTTCTTCCGC GTAGGCGACA CCCGGAGCTA TGAAGCCCTG TTGCCAAAAC GGTTCAGCGA CAATACGACC GAGCGACAAA CAGGGGGTAG TTATGCTTCT CCCCTGCGCA ACCTGGCCCT CGTTCTCGAT GTACTTGTCG ATACCAACCC GGACAACATT CAAATTCCAG CGCTGGCAAG GCAACTGTCA GCGGCTCTGA AACAATCTGC CTATCTGAAT ACGCAGGAAG CGGCTTTTGC TTTTCTGTCG CTCGGCAAAC TGGCCCGGCA AACGGCGGGC AGTACAGCAA CCGCTACGTT AACAGCCGCC GGAAAGCCAC TTGGCAATCT TACAAATGCT CCATTGACGA TTAAGCGGGT ACCGACCAAT GCTCCGCTTA CCCTAAGCGC CAATGGTACC GGCAGCGTTT ATTATTATGC ACAAAGTGAA GGCATTCCGG CCAGCGGCAA ATTAACCGCC GAAGACAATG GCCTGCAGGT TCGTCGGCAA TACCTCAACC GCGACGGTAA GCCGATCGGC GATATCCGGC AGAATGACCT GGTGGTTGTT AAAATTACCC TGGCCAGCCA GAGTGGTCTT ACCGTCGACA ATGTTGTGGT AACAGACCTG CTTCCAGCGG GTCTGGAAGT GGAAAATCCA CGCCTGACCG GATCACCGGG CCGCGAAGCC AATGATATGC CCTGGCTCAG TAAATCTAAG TCGGTAGTGA CGGACCAACC CGACCATTTC GACCTGCGCG ATGACCGGAT CAACTTTTAC ACCACGGCAA CGGGTACTGA ACGAACGTTT TATTACCTGG CCCGGGCCGT GTCGAAAGGC CGGTTTGTGC TGGGCCCCGT ATCGGCTGAT GCCATGTACA ATGCGGAGTA TCGCAGTTAT AACGGAGCGG GAATCATAAC CATTCGGTAG
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Protein sequence | MYTRPYLTSL LTGLLFVFAF SHCSRLSFND VSVVGRNFSD EVQQTQNLTF TFNKNIGPAS HLDEWDSTQY VRFIPAVRGK YKWTAPNELV FSPARAFDQA TDYRAELTDN LVRYADKKDL KVSDEVIAFH TPYLQLTTVE NWWSRDRATG QPVARTRLNF NYPVSSTEVI EKLTVAADDK ALTVQSAPSD AANSVALTLT NAPSLKNEQP LSLKIDKGVK VPKTAFVSKD AINETSTLPS RYAVDIADVQ TTFENNRGVI KVITTQELQP QSGGAAGDLS AYFTIQPSVE TTAELTENGF IIRGNFNEAD TYVLTLTDQI RGVLGNKLAE PVTRDLFFGK MPASIQFANK KALYLSSKGA RNVGLNIVNV PKVQVKIVKV YENNLLNYLR SNRYEEYTEK ANGEWGPSGS FNYSADETGE LSDVLVDKTV ETTDLPKVRG VSALNLALPD QNNNFREHPL RGVYLVSVNS KDEAYLQASQ LVSVSDIGLI ARHTNDEVLV WANSIRTGEP LQSVEVTLIS SNNQSVYTLK TDGTGFVKFD KVSEKAPGFK IALLTARTTT PATASQSNQD DFNFLFLPDT QVETSRFEVD GKRDNPSGFD AFVYGDRDIY RPGDTIHFNT IIRSQTWQSV GQIPIVVRVL MPNGREFRAF RKTTDAQGSV TTDVPLDPAA VTGSYTVEIL NANNVLLASE SISVEEFVPD RIKVNVLTDQ TSYKAGQTIT LSATAMNLFG PPASDRAYEM ELQLKRKAFA PKGFGEYAFD MTNGTSPGSE PAKTDLFPKE LRQGRTNANG QATERFPISQ LYQDIGLLEA KMFVTVFDEN GRPVNRLRRL DILTQDTFYG LRLPDRYVAT NAPLAVDLVA LDPAGQLRAS ASAIVEVIRF DYQTVIEKAD NNVKYTTKRR EKSVYTNTLL FKGGKASFRY VPTVSGEYEV RVRRPDAAAD KYAATGFYAY GFGSTSASSF EVSQEGQVLI ETGQSTVQTG DKVKVLFKAP FDGRLLVTVE RNHVLEQHWL TTTNKSAEWS FSAGVDHLPN VYVTATLIRA IDATNLPLTV AHGFTSIAVQ DRYTRLPVTL TAVTQSRSKT KQTIRVKTAG SAQVTIAVVD EGILQLKNFK TPDPHGFFYQ KRALEVTSHD LYALLYPELS LQSKSSVGGD GYDLERRVNP LSNGRVRLVA LWSGIKKADS DGNVEFPIDI PQFSGDLRVM AVAYKNEAFG SANSNIKVAD PIVISTGVPR FLTPGDRVEL PVNLSNTTKQ VATVTARLNL TGPLAADSIS TQKLTIQPGR ESRAIFRVAA QQAIGAGAIT VTVNGLNETF TEKTEITVRP AASLQKTTLS GAVAGGKTQA IRLAGGFLPG TARASVTLSR SPVAQYGREL SFLLGYPHGC LEQTISKAFP QLYFADLAKQ VSASTYFVRA GESDLNPATN IRQAVQQVEG LQAQNGGFTM WPGMAAVSGK SNVDAWATAY AVHFLAEAQE AGYEVRSSIL SSAIDYLTTL TNSPATENAV TFDEAGGRTV KQVASRTTIY ALYALSVAGK PNRSAMNYYK QNAGLLTNDS RYLLASTFFR VGDTRSYEAL LPKRFSDNTT ERQTGGSYAS PLRNLALVLD VLVDTNPDNI QIPALARQLS AALKQSAYLN TQEAAFAFLS LGKLARQTAG STATATLTAA GKPLGNLTNA PLTIKRVPTN APLTLSANGT GSVYYYAQSE GIPASGKLTA EDNGLQVRRQ YLNRDGKPIG DIRQNDLVVV KITLASQSGL TVDNVVVTDL LPAGLEVENP RLTGSPGREA NDMPWLSKSK SVVTDQPDHF DLRDDRINFY TTATGTERTF YYLARAVSKG RFVLGPVSAD AMYNAEYRSY NGAGIITIR
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