| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5064 |
|---|
| Symbol | |
|---|
| ID | 8728829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 6185696 |
|---|
| End bp | 6188257 |
|---|
| Gene Length | 2562 bp |
|---|
| Protein Length | 853 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | conserved repeat domain protein |
|---|
| Protein accession | YP_003389838 |
|---|
| Protein GI | 284039908 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATACT TTGTACTGTT ATTAATCTCA GTGGCCCTGT TTCCGGTAGA AATGCTTGCG
CAGCGCCCTG ACCATCCAAC CCATCCCCTA CCGCTTTGTG CCACAACCGA TCTGACAGAA
GCAGAGCGTA ACGAATTAAA CCTCCAGGCC GCTCAGGCAC TGGCCGCCAA ACGAGCCTCG
AATGCTGTAT TCACGACTAT CACCTACGTA CCCATCCGAC CACACATACT TCGCAAGAGC
GATGGCACGG GCGGCATGTC GCTGGCCAGC ATAAACCAGG TCATTGCCAT TACCAATAGT
TACTACCTAA AAAATGGGTT CGGTATCCAG TTTTACTTCT GCGGAACTTC GCCGGACTAT
ATCAATAATG ATACAGAATA CAACAGCTTT AGTAACGAAA CGGCGCTGAC TCAGGGGCAC
GACGTGACTA ATGCGATGAA TCAGTATTAT GTCAACTCGT TTGCCTCAGG AGCCGGGGGC
TATGCGTATT ATCCGGGGAA TAGTCTGGTT ACAACCCGCT CATTTATTCT GAATGAATCC
TGGAATGAAG ATGACATGGG AAACCGGCTG ATTCCTCACG AGTTAGGGCA CAACTTTAAC
CTTGTCCACA CTTTTGGACA AGTGCCCGGA AATGGAACCT TAGGATCGGG AACTACGCTT
GAATTAGTTA CGCGCGGAAC CGGAGCCAAC TGTACGACCG AGGGTGACTA TATCTGCGAT
ACACCGGCCG ACCCCTACAA CAAAGCTGGT GCTAACCTGC TGTACGTTAA CGGTTGCCCG
CAATACGACC CAGCCAGTAC CGCACGCGAT GCCAATGGTA TAGCCTACAC GCCATCTATT
AGCAATATCA TGTCGTACTA TTTCCCATGT AGCCATGACT TCACCCCAGG CCAGTACGAC
CGGATACAGG CAGGTCTGGC CCTTCGTCAG ACGCATACTG CCTATACCTT GGACTGTCCT
CCTACGGCGG TTCCGACACC TACCAATCTG GTGTTATCTA CCACAGGCAG TGCCGTTTTA
CTGACCTGGC AGGATAACGC CAGTAATGAA ATGGGGTATT TCATTGAGCG CTCCCAGTCG
CCTACATCGG ACTTTTTGCC CATTGGGGGC GTAGGTCCCA ACACGAGTAC ATTCACAGAC
TCAAAAACGA CTCCTTCAAC TGTCTATTAC TACCGCATTC GGCCATCTAA CGCCACAACA
TCGGGAGTTA GCCAAATCGT TAGTATACGA TCCCCTTCCT GTCGGCCAGT ATATGCTTAC
TCCTGTACCT ATGGCGATGG TCTGGCAAGC TTCTCAATCA ATAATAACTT TTTGAGTCAA
AACTCGGGTT GCTCAACTAA TGGATACGGG CTGTTTAATG TGACATCGAC AACGCTTGTT
GCAGGCCAAA CTTACCCTGT GTCGGGCACC CTGCTGACTG CTAACCTCAC GCAGGGTGTA
GCGATCTGGG CTGACTTAAA CCGGAATGGT GCCTTCGAAA CCAGCAAAGG CGAACTTTTG
TATCAAACAC CATCTCTTGT ACTCGCGTCA TTCTCAGGCA AACTTGCCTT ACCAGCCAGC
CTGACGGCAG GTACGCTTAC CCTTCGGGTT ACGGTAGTAT ATAATGTATT ACCAGGCGAC
CCGTGCGGTA ACTATACTTA CGGTGAGACG GAAGACTACG TAATCAGCAC GACTCGTTCC
ACCGATCTAA GTTTATCTCT GCAAACTAGT AACCGAACGC TATCGGTCAA TCAACCCGTT
AGTTACTCCC TTACGCTTCA GAACGCGGGA CCCAGTGACG CCACGGGCAT TAGCTGGCAA
AACGCCCTGC CAGCCAATAT GAGCTTTGTT AGTGGAGATG CCAGTATTGT CAGTTCAGGT
ACAGCTGTGG GCGTCAGCAA TTTATCACTT GTAAGCGGCA CGTCGGCATC ATTCGTCTAT
CGCTTAAAGA CGGGTCAGGA AGGCACATTT ATCAATGCAG CTCAAATAAC GGCGAGTAAC
GAACCAGACC CCGATAGCAA ACCCGGTTCG GGTACGGGCG ATGGACAGGA CGATGCCGCC
ACAGTGGATA TACGAACAAG AGTGGCTAGC ACCGTATACA CATCTCCCAA TCCAAATCAA
ACGCCTTTAC CACCGGTGTT ATCAGGTCAG CCCACCCCCG ATCCGGCGAA AGCGGATTTA
TCACTTGCTA TGCGTGTCAA TCAACGAACA CCCGCGCTTG GCCAGAATGT AACATTTACC
ATTACAGTCA GCAATGCGGG TGGCCTGACA GCGACAAACA TCGTTGTGCG CGACACCGTA
AGGGGATTGA CATTAGCGCC CTTACCAGCG GGAATGGCCG TCGTAAGTAC AACCGGCAGT
TACACAATTA TTCAGGGCAC AATTGCCTCA CTGGCAAAGG AAGCATCGGC GCAACTAACG
TTTACCGGAA CACCTACTCT GGCCGGACAC CTAACCAACG CAGCGCAAAT ATGGTCTGTC
GACACCCCGG ACCCCGATTC CAAACCAGGA GCGTCGACGC CAACCGCCAA CAACCTGAAC
GGTGAAGATG ATGTAGCCTG GGTCGATTTA AAAGTCCGCT GA
|
|---|
| Protein sequence | MRYFVLLLIS VALFPVEMLA QRPDHPTHPL PLCATTDLTE AERNELNLQA AQALAAKRAS
NAVFTTITYV PIRPHILRKS DGTGGMSLAS INQVIAITNS YYLKNGFGIQ FYFCGTSPDY
INNDTEYNSF SNETALTQGH DVTNAMNQYY VNSFASGAGG YAYYPGNSLV TTRSFILNES
WNEDDMGNRL IPHELGHNFN LVHTFGQVPG NGTLGSGTTL ELVTRGTGAN CTTEGDYICD
TPADPYNKAG ANLLYVNGCP QYDPASTARD ANGIAYTPSI SNIMSYYFPC SHDFTPGQYD
RIQAGLALRQ THTAYTLDCP PTAVPTPTNL VLSTTGSAVL LTWQDNASNE MGYFIERSQS
PTSDFLPIGG VGPNTSTFTD SKTTPSTVYY YRIRPSNATT SGVSQIVSIR SPSCRPVYAY
SCTYGDGLAS FSINNNFLSQ NSGCSTNGYG LFNVTSTTLV AGQTYPVSGT LLTANLTQGV
AIWADLNRNG AFETSKGELL YQTPSLVLAS FSGKLALPAS LTAGTLTLRV TVVYNVLPGD
PCGNYTYGET EDYVISTTRS TDLSLSLQTS NRTLSVNQPV SYSLTLQNAG PSDATGISWQ
NALPANMSFV SGDASIVSSG TAVGVSNLSL VSGTSASFVY RLKTGQEGTF INAAQITASN
EPDPDSKPGS GTGDGQDDAA TVDIRTRVAS TVYTSPNPNQ TPLPPVLSGQ PTPDPAKADL
SLAMRVNQRT PALGQNVTFT ITVSNAGGLT ATNIVVRDTV RGLTLAPLPA GMAVVSTTGS
YTIIQGTIAS LAKEASAQLT FTGTPTLAGH LTNAAQIWSV DTPDPDSKPG ASTPTANNLN
GEDDVAWVDL KVR
|
|---|
| |