Gene Slin_5033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5033 
Symbol 
ID8728798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6137222 
End bp6137728 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389809 
Protein GI284039879 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.871359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGGTC TATTATATTT TCTGTTGTTT TTATTAGTCA TTTTCGGTGT TCTTTATGCG 
CTCACCGGCT GGAGTTACAG TGATGGCGAA CGGGCCGGTA CGGTCTCCAA GTTCAGTCGC
CGGGGTTTCC TTTTCAAAAC GTATGAAGGC GTACTGAATG TAGGTGGCTT CTCGGGCGAA
ACCGGCTCCT TAACTCCCCA GTATTTTGAT TTCTCGGTGA AAGATGATGC CGTAGCAGCT
CAGGTTACGC AGGCTGTCAA AACAGGGCAG CGGGTAACCC TGCACTACGA AGAGAAGATC
CTGAAGTTTC CCTGGAATGG CGAAACGAAA TACTACATTA CGGCCGTAGA AATAGTAGGT
CCACCAGCAC GTCCGTACGG AGACAGCTCT GCATATCCGG GCTATCAGCA AGGCCAGCCA
CAGCCAGCTC AGCCACAGCA GGCACAGCCG CAAACCCAGC AGCCTGCACC CGCTCAGCAG
CCCGCTATGG CCGACACCCT ACGGTAG
 
Protein sequence
MRGLLYFLLF LLVIFGVLYA LTGWSYSDGE RAGTVSKFSR RGFLFKTYEG VLNVGGFSGE 
TGSLTPQYFD FSVKDDAVAA QVTQAVKTGQ RVTLHYEEKI LKFPWNGETK YYITAVEIVG
PPARPYGDSS AYPGYQQGQP QPAQPQQAQP QTQQPAPAQQ PAMADTLR