Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4957 |
Symbol | |
ID | 8728721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6042566 |
End bp | 6043753 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | amidohydrolase |
Protein accession | YP_003389734 |
Protein GI | 284039804 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00657786 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCGATT CAATCAAATC CCTTGCCCGG CAATATGCGG CCGACATCGT GCAAACCCGC CGACACCTGC ACGCGCACCC CGAACTTTCT TTCCATGAGC GAAATACGGC CCGCTTCGTC GCCGATCAGC TCAAAGCCAT TGGCATAACC CCGCAGGAAG GCGTAGCCGA TACGGGCCTG GTGGCCATTG TTGAAGGACG TAACCCCGGC AGTCGGGTTG TCGCGCTTCG GGCCGATATG GATGCGCTGC CCATTCACGA AGCCAACGAT GTACCGTACA AATCGACCGT CGATGGCGTT ATGCATGCCT GTGGACACGA TGCACACACG GCCAGTTTGC TTGGTGTTGC CCGTATTCTG CACGTTTTAC GCGATCAGTT CGATGGCACG GTCAAGCTGG TTTTTCAGCC GGGCGAAGAG AAAGCACCCG GTGGCGCATC ACTCATGATT AAAGAAGGTG TGCTGGAAAA TCCGGCCCCC ATGAGCATGA TCGGTCAACA CGTGGCACCC AATATTCCGG TGGGTAAAAT CGGCTTCCGC GAAGGCATGT ACATGGCCAG TACCGACGAG CTTTACCTGA CCGTTCGCGG CAAAGGGGGC CACGCGGCCA TGCCGGATAA TCTGGTCGAT CCGGTGCTGA TCGCTTCCCA TATTATTGTT GCCTTACAGC AGATCATCAG CCGCAACCGG CCGCCGTCCA GCCCGTCGGT TCTGTCGTTT GGCCGGTTCA TTGCCGATGG CGTTACAAAC GTCATTCCTA ACGAAGTGAC TATTCAGGGC ACGTTCCGGT GCATGAATGA AGAGTGGCGC GAAGAGGGCA AAAAACGCAT GGTCAAACTG GCCGAAGGGA TAGCCGAAGC CATGGGCGGC TCCTGCGAAT TCACGATTGT TCATGGATAC CCGTTCCTGA AAAACCACCC CGAGCTAACC CGGCGCGTTC GGTCGCAGGC TGTCGAGTAT ATGGGTGCCG AAAACATCGT TGACCTCGAT CTATGGATGG CGGGCGAAGA TTTTGCGTTC TATTCACAGG TTGTCGACTC CTGTTTTTAT CGACTCGGCA CCCGAAACGA AGCACGCGGT ATCGTGTCGG GGGTTCACAC GCCCACCTTC GACATCGACG AAGCATCGCT GGAAACGGGT GCTGGGCTGA TGAGTTGGCT GGCCGTGCAG GAGTTGCGGG TTGTGTAA
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Protein sequence | MLDSIKSLAR QYAADIVQTR RHLHAHPELS FHERNTARFV ADQLKAIGIT PQEGVADTGL VAIVEGRNPG SRVVALRADM DALPIHEAND VPYKSTVDGV MHACGHDAHT ASLLGVARIL HVLRDQFDGT VKLVFQPGEE KAPGGASLMI KEGVLENPAP MSMIGQHVAP NIPVGKIGFR EGMYMASTDE LYLTVRGKGG HAAMPDNLVD PVLIASHIIV ALQQIISRNR PPSSPSVLSF GRFIADGVTN VIPNEVTIQG TFRCMNEEWR EEGKKRMVKL AEGIAEAMGG SCEFTIVHGY PFLKNHPELT RRVRSQAVEY MGAENIVDLD LWMAGEDFAF YSQVVDSCFY RLGTRNEARG IVSGVHTPTF DIDEASLETG AGLMSWLAVQ ELRVV
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