Gene Slin_4932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4932 
Symbol 
ID8728696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6006613 
End bp6007437 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content33% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003389709 
Protein GI284039779 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.399763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGCT TTGTTATGAA AAGAAATGAC TATAAAATAT CAAACTCACT TTCTGACCAT 
AATGGGCATC CCGCAGTGAC AGTGATCACC GCAGTATATA ATGCAGAGAA TTACATTGCT
GAATGTATAT TAAGTGTAAT TAATCAGTCT TACCATAACT TTGAATATAT AATTATTGAT
GGCGGTTCGA CAGATAATAC TGTTAATATT ATTAAGCAAT ATGAAAAACA TTTAGCATAT
TGGATAAGTG AGCCAGACAA AGGAGTGTAT GATGCCTGGA ATAAGGCTTT AATGAAGTCA
AAAGGAGAAT GGATCACTTT TGTGGGTGCT GATGACCAGT TACATTTAGA TGCTTTACAT
TTATATATGG AGCACATTAA CGCACATCCA TTAAAAGATA AATTAGAATT TATTTCCTCT
TTTATAGAAT TAGTTAATGA GGATTTGTCA CCAATAAGAA CAGTTGGAGC AGCTTGGAAA
TGGCAAGACT TTAAACGAGA AATGACTACG TGGCATTTAG GTGCTTTTCA TTCTAAAAAC
TTATTTATCA AATACGGAAA CTTTGACACT TCCTATAAAA TTTCAGGTGA CTATGAATTC
CTATTGAGAG CTAAAGATCA GCTTAATACA TCATTTATTG AGCAGCCAAC TGCCAAAATG
CGCTCCTGTG GTATGAGTAA TGTAATGCTC TTTAAAGCAA GTGAGGAGAC TTACAAAGCT
AAGATTAAGA ACAAAGTATT ATCTAATGTT AAAGGGCAAG CATTAATACT TATTGATAAG
TTTAGACTTC TAGTTAGAAA ATCATTTGGT TGGAAAAGAT TCTGA
 
Protein sequence
MNCFVMKRND YKISNSLSDH NGHPAVTVIT AVYNAENYIA ECILSVINQS YHNFEYIIID 
GGSTDNTVNI IKQYEKHLAY WISEPDKGVY DAWNKALMKS KGEWITFVGA DDQLHLDALH
LYMEHINAHP LKDKLEFISS FIELVNEDLS PIRTVGAAWK WQDFKREMTT WHLGAFHSKN
LFIKYGNFDT SYKISGDYEF LLRAKDQLNT SFIEQPTAKM RSCGMSNVML FKASEETYKA
KIKNKVLSNV KGQALILIDK FRLLVRKSFG WKRF