Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4932 |
Symbol | |
ID | 8728696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6006613 |
End bp | 6007437 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | |
Product | glycosyl transferase family 2 |
Protein accession | YP_003389709 |
Protein GI | 284039779 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.399763 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTGCT TTGTTATGAA AAGAAATGAC TATAAAATAT CAAACTCACT TTCTGACCAT AATGGGCATC CCGCAGTGAC AGTGATCACC GCAGTATATA ATGCAGAGAA TTACATTGCT GAATGTATAT TAAGTGTAAT TAATCAGTCT TACCATAACT TTGAATATAT AATTATTGAT GGCGGTTCGA CAGATAATAC TGTTAATATT ATTAAGCAAT ATGAAAAACA TTTAGCATAT TGGATAAGTG AGCCAGACAA AGGAGTGTAT GATGCCTGGA ATAAGGCTTT AATGAAGTCA AAAGGAGAAT GGATCACTTT TGTGGGTGCT GATGACCAGT TACATTTAGA TGCTTTACAT TTATATATGG AGCACATTAA CGCACATCCA TTAAAAGATA AATTAGAATT TATTTCCTCT TTTATAGAAT TAGTTAATGA GGATTTGTCA CCAATAAGAA CAGTTGGAGC AGCTTGGAAA TGGCAAGACT TTAAACGAGA AATGACTACG TGGCATTTAG GTGCTTTTCA TTCTAAAAAC TTATTTATCA AATACGGAAA CTTTGACACT TCCTATAAAA TTTCAGGTGA CTATGAATTC CTATTGAGAG CTAAAGATCA GCTTAATACA TCATTTATTG AGCAGCCAAC TGCCAAAATG CGCTCCTGTG GTATGAGTAA TGTAATGCTC TTTAAAGCAA GTGAGGAGAC TTACAAAGCT AAGATTAAGA ACAAAGTATT ATCTAATGTT AAAGGGCAAG CATTAATACT TATTGATAAG TTTAGACTTC TAGTTAGAAA ATCATTTGGT TGGAAAAGAT TCTGA
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Protein sequence | MNCFVMKRND YKISNSLSDH NGHPAVTVIT AVYNAENYIA ECILSVINQS YHNFEYIIID GGSTDNTVNI IKQYEKHLAY WISEPDKGVY DAWNKALMKS KGEWITFVGA DDQLHLDALH LYMEHINAHP LKDKLEFISS FIELVNEDLS PIRTVGAAWK WQDFKREMTT WHLGAFHSKN LFIKYGNFDT SYKISGDYEF LLRAKDQLNT SFIEQPTAKM RSCGMSNVML FKASEETYKA KIKNKVLSNV KGQALILIDK FRLLVRKSFG WKRF
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