Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4927 |
Symbol | |
ID | 8728691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6001698 |
End bp | 6002627 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | glycosyl transferase family 2 |
Protein accession | YP_003389704 |
Protein GI | 284039774 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.640418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.791087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATATCTG TAGTTATTCC AACATATAAT GCTGCGGCCT TTCTGCCTCT TTTGTTAAAT AGGCTGAAGG AGCAAACGAT GCCTCATGAA TTGATTATTA TTGATTCCGA ATCGAATGAT GGTACCGTAG GTCTTATTGA TTCAAAGAAC GTAACTCTTG TATCAATCAA AAAGGAATCC TTTAATCATG GCTCTAGCCG CAATCTTGGT TTGAAGTTGG CTAAGTACGA TATCGTTGTG TTTATGACAC AAGATGCCCT TCCTGCTAAT CCAAACACTT TAGAAAGATT GGTAACCATG CTGACTAGCC AGGGTAATAT TGCGATGGCG TATGGGCGTC AATTACCTTA TCCTGAAACT GGTATTTTAG GGCGATTCGC TCGTTTAACA AACTATCCCA GATATAGTCT TATTAAGACT AGAGCATTAA TTCCAGAAAT GGGCATTAAA ACTTGCTCTT GTTCAAACTC ATTTGCTGCT TATCGTAAAT CTGAGTTACT AACTGTCGGG GGCTTCCCAT CAGATACAAT ACTGGGTGAA GATGTATCAG TAGCTGCCCG CTTTATTCTT AAAGATTTAG CTGTGGCTTA TTGCGCCGAG GCTGAAGTGT TTCACTCACA TGATTACACG GTAGTTGAAG AGTTCAAGCG CTATTTTGAT ATTGGAGTAT TTCATCATGA ACAACGTGCT GTCTTAAATG AGTTTTCTAA GGCAGAGTCA GAGGGGTTCA AATATGTCAT TCAGGAGTGC AAATACCTTC GCCAAAATGG TCATATTTCG CTTATACCGC AACAACTAGC GAGGACAGTA GTGAAGTATA TTGGCTATAA GATGGGTAAG GCCGAAAACC GCCTTCCTAT TGCCTTGAAG CGAAAGTTTA GTATGCATCC TGCTTTTTGG CAGCCTTCTA CAAGGGAATC GAGCCATTAA
|
Protein sequence | MISVVIPTYN AAAFLPLLLN RLKEQTMPHE LIIIDSESND GTVGLIDSKN VTLVSIKKES FNHGSSRNLG LKLAKYDIVV FMTQDALPAN PNTLERLVTM LTSQGNIAMA YGRQLPYPET GILGRFARLT NYPRYSLIKT RALIPEMGIK TCSCSNSFAA YRKSELLTVG GFPSDTILGE DVSVAARFIL KDLAVAYCAE AEVFHSHDYT VVEEFKRYFD IGVFHHEQRA VLNEFSKAES EGFKYVIQEC KYLRQNGHIS LIPQQLARTV VKYIGYKMGK AENRLPIALK RKFSMHPAFW QPSTRESSH
|
| |