Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4870 |
Symbol | |
ID | 8728634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5931813 |
End bp | 5932709 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003389647 |
Protein GI | 284039717 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACT TTCGTCTGAA CGTTTTTTAT ACCGTTGCCA AACGGCTGAG TTTTACTAAA GCGGCTGCCG AACTGTATGT GACGCAACCT GCCATAACCA AACACATTCA GGAACTCGAA CATCAGTTTG GAACGGCCCT GTTCGACCGG CGCGGGAATC AGATTAGCCT GACTGCTGCC GGAAATGTAC TGCTCCGCCA TGCCGAAACC ATCATGGCTA CCTACCGCCA GCTGGAGTTC GATATGAACG CCCTCAAAGG CGAATCAGGT GGGACGTTGC GGGTGGGGGC CAGTACAACG GTGGCCCAGT ACGTCATTCC GCCGGTGCTG GCCCGCTTCC GGGAGCAATC GGCCGATGTG GCGATCTCGC TGGTGTCGGG GAATACCGAG CAGATAGAAC AGTTACTGCT TAATAATGAT ATTGACCTGG GACTGGTGGA GGGCCGGACG CACCACAGCG ATATTCGGTA CACGTCTTTC GTTAAAGACG AGCTTGTGCT CATCTGCCGC GCCGATCACC CCCTGGCCGA CCGGGATGAG ATTACGCTGG ATGAACTGCG CCTGATTCCC ATTGTGCTTC GGGAAAGGGG GTCCGGTTCT CTGGAGGTGG TCGAACACGC ACTCCGGGGG GTGGGCGTAA AGCTTACCGA TCTGACCATC GACATGCACC TGGGTAATAC CGAAAGTATA AAGTCGTATC TGGGCAGCTC GCGCTGTATG GCGTTTGTAT CGGTCTTTGC CGTGCAGCAT GAACTTCAGG CCGGGAGTCT CAAAATTCTT GATGTGCAGA ATCTCTCCAT TCAGCGGGAC CTGTATTCCA TTCAATTACA AGGCGTAAGC GAAGGCCTGG CCGATACCTT CATGCGGTTT GCCCGACAGC ATTACAAACG CCGATGA
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Protein sequence | MLDFRLNVFY TVAKRLSFTK AAAELYVTQP AITKHIQELE HQFGTALFDR RGNQISLTAA GNVLLRHAET IMATYRQLEF DMNALKGESG GTLRVGASTT VAQYVIPPVL ARFREQSADV AISLVSGNTE QIEQLLLNND IDLGLVEGRT HHSDIRYTSF VKDELVLICR ADHPLADRDE ITLDELRLIP IVLRERGSGS LEVVEHALRG VGVKLTDLTI DMHLGNTESI KSYLGSSRCM AFVSVFAVQH ELQAGSLKIL DVQNLSIQRD LYSIQLQGVS EGLADTFMRF ARQHYKRR
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