| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4781 |
|---|
| Symbol | |
|---|
| ID | 8728545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 5823204 |
|---|
| End bp | 5824241 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | anti-FecI sigma factor, FecR |
|---|
| Protein accession | YP_003389558 |
|---|
| Protein GI | 284039628 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGGA AGACGTTCAG GCAACTCCTG GAAAAGTATC TGCGGGGCGA ATGTACACCA
CAGGAGAAGC GATTTGTTGA GCACTGGTAC GGTCTGCTGG AAACAGAAAC CGGCGAATCC
GGCGAGGAGC TGGACATGGA CGAACTCGAA GGACGTCTCT GGAATCAGAT CCAAAAAAAA
ATGGATACCG GCGAAGAACC TGAACAGGGG CGCATCGTAC CTCTGAAACG CGTTCGGTAC
CGCTGGCTCG GCATAGCAGC CTCCCTGCTG CTCATTGGCG GCTGGTTTTA CTTCAGCCAG
CCCATCCGGA ATCTGCTGCC CGGTCAGGCG CTCTCGGTCG AGGAGCAGAC CGGCTGGCTT
GACCGGTCGA ATACATCATC GCGACCAATG ACCGTTCGGC TGGAAGATGG CAGCGTTGTT
CAACTGTCGG CCAAAAGCTC TCTTCGATTT CCCAAACACT TTGCCGCCGA TAAACGCGCT
GTTTACCTGA CCGGCGATGC CTTCTTTTCA ATTCAGAAAA TGCCCGCCCG CCCGTTTTAT
GTGCACACCG GCGAGGTAGT TACCAAAGTA CTAGGCACGA GCTTCTTCGT CCGGACCCAA
GCCGAATCGG GAAAGGTTCG GGTTGAAGTG GTTACCGGGC GCGTTACGGT GTACAAGCAG
GAATCGGAGA AACAGACATC GGCGAACGGC GTTTTTCTAA CCCCCAATCA GGCCGCTACC
TTCTTTGCCG ACGAGCAGCA CTTTGTAACG GGTCTGGTGG ATGCGCCCAA AGTCATTCAG
CCAGCAGAAG CCGAGAAAAA AACCATTTCA CTGGCGTTCG ACGACACGCC ACTGGCGGAT
GTTCTGGCGC AGCTTGAACG GGCATATGGC ATTGCCATTG AACTGGAAAA CGACCAGCAA
AAAAACTGCC CGCTTACGGC CAATCTGACC GATCAGCCGC TATACACACA GCTGGATATT
ATTTGCGCGG CATTGAAATC AACCTATAAA ATTCAGGGAA CGACCATTCT GATCAGCGGA
AAAAGCTGTA CTGAGTAG
|
|---|
| Protein sequence | MSRKTFRQLL EKYLRGECTP QEKRFVEHWY GLLETETGES GEELDMDELE GRLWNQIQKK
MDTGEEPEQG RIVPLKRVRY RWLGIAASLL LIGGWFYFSQ PIRNLLPGQA LSVEEQTGWL
DRSNTSSRPM TVRLEDGSVV QLSAKSSLRF PKHFAADKRA VYLTGDAFFS IQKMPARPFY
VHTGEVVTKV LGTSFFVRTQ AESGKVRVEV VTGRVTVYKQ ESEKQTSANG VFLTPNQAAT
FFADEQHFVT GLVDAPKVIQ PAEAEKKTIS LAFDDTPLAD VLAQLERAYG IAIELENDQQ
KNCPLTANLT DQPLYTQLDI ICAALKSTYK IQGTTILISG KSCTE
|
|---|
| |