Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4753 |
Symbol | |
ID | 8728517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5786958 |
End bp | 5788343 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | UDP-N-acetylmuramate/alanine ligase |
Protein accession | YP_003389530 |
Protein GI | 284039600 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTAG ATCAATTTAA ATACATTTAT TTTCTCGGCA TCGGAGGAAT TGGTATGAGT GCCCTGGCCC GCTGGTTTCA GGTGAATGGC TATGCTGTAG CTGGATACGA TAAAACACCC ACCGCCCTGA CCAACGTACT TGAATCGGAA GGAATGGTTA TCCACTTTGC GGAAGATGTT GATCAGATTC CGGCCGAATT TCGGGCTAAC CCAGCCGAAA CATTGGTTAT TTACACCCCC GCTGTTCCCA AAACACACGC GGAGTATCTT TATTTAACCG AACAGGGTTT TACCCTCCAG AAACGATCAC AGGTGCTGGG GCTGCTGGCC GGGCAAATGA CAACCATCGG CGTAGCCGGT ACACACGGCA AAACCACAAC ATCGTCGATG GTTGCGCACA TACTCCGTGA TTCGGGGGTT AACTGCGCGG CTTTTCTGGG CGGAATTACC AACAATTACG GCACAAACTT CCTGCTCAAT GAACCAGCCG ACGACCTCAA ATCCGTCGTT TGTGTCGTTG AAGCGGATGA GTTCGACCGC TCTTTCCTGA CGCTCTTTCC CAAATACGCC ATCGTAACCT CTACGGATGC CGACCATCTC GATATTTACG GAGCACATGA TGCTGTCCTT GAATCGTTCG GCAAGTTTGT TGGCCAGATT GAGCCCGATG GCGTTCTGTT TATGAAAAAA GGGCTTTCGC TGACGGATAA AACCCAGGCG GCCGTTCGCC CTTATTCGTT GAAAGAGGGC GACTATTACA GCCAGAACTT ACGGATCGAG AATGCGTCAT TCGTCTTCGA TCTGGTCTAT CCGGGTGGTG TCATCGCTGA TATTCATTTG TTAGTTCCGG GTTTTCACAA TGTGGAAAAT GCCGTGGCCG CCGGAGCAGT AGCGCTTGAA GTTGGCGTTT CGCCAGAAGC CATTCGATCG GCGCTGACGA GTTACCGGGG GGTTCGCCGT CGTTTCGAGT ATATTTTGAA AACCGATTCG ACTGTTTTCA TCGACGACTA TGCCCACCAC CCGGCGGAGG TAGAGGCTTT TTTATCGTCG GTAAAAGCAC TTTACCCCAA TCGTGACATA ACGGCTATTT TCCAACCCCA CCTCTTTAGC CGCACACGCG ACTTTGCCGA CGGGTTCGCC GAGAGCCTTT CTCTGGCAGA TCACGTCATT TTATTAGATA TTTACCCGGC GCGTGAATTA CCAATGGAAG GAGTTACTTC CGATCTGATT TTTCGGAACA TACACTCGAA AACCAAAATA AAATGCACCA AAGCTGAATT AGTCAACGTT CTGCGGGAAA TGAAGCCTTC TCTACTTGTC ACTATAGGGG CGGGGGATAT TGACCAACAG CTGGAAACAA TAAAAACCCT GCTAAAAGAC CAATAG
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Protein sequence | MTLDQFKYIY FLGIGGIGMS ALARWFQVNG YAVAGYDKTP TALTNVLESE GMVIHFAEDV DQIPAEFRAN PAETLVIYTP AVPKTHAEYL YLTEQGFTLQ KRSQVLGLLA GQMTTIGVAG THGKTTTSSM VAHILRDSGV NCAAFLGGIT NNYGTNFLLN EPADDLKSVV CVVEADEFDR SFLTLFPKYA IVTSTDADHL DIYGAHDAVL ESFGKFVGQI EPDGVLFMKK GLSLTDKTQA AVRPYSLKEG DYYSQNLRIE NASFVFDLVY PGGVIADIHL LVPGFHNVEN AVAAGAVALE VGVSPEAIRS ALTSYRGVRR RFEYILKTDS TVFIDDYAHH PAEVEAFLSS VKALYPNRDI TAIFQPHLFS RTRDFADGFA ESLSLADHVI LLDIYPAREL PMEGVTSDLI FRNIHSKTKI KCTKAELVNV LREMKPSLLV TIGAGDIDQQ LETIKTLLKD Q
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