Gene Slin_4674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4674 
Symbol 
ID8728438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5694543 
End bp5695382 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389451 
Protein GI284039521 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.929518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.751673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGTA AACTTGTAAA AATTCTGTTA GGCATCGTCC TCGTTTTGGC TCTGTTGATA 
GGCGGCTTTG TTACGTTCGG GATGTATGTA ACCCGTAAAT TACCCTGGCA AAAGCCGATT
TTTGAAACCA CCCGTCCCGC CGACCCCGGC CAGGTTGGCC CAAAAGGCGT TCTGATTTTC
TCCAAAACAA ATGGCTTCCG GCACGAGTCC ATTGAGCCGG GTATCGAAGC CCTAAAAAAA
GTGGGTAAAG AAAAAGGCTG GGATGTTCGA ACTACCGAAA ACGGGGCCTT CTTCAACGAC
GATTACCTCA GCCGATTTAA AACGGTGGTT TTTTTATCGA CCACGGGCGA TGTGCTGACG
CCGGAGCAGG AAAAAGCCTT TGAAAAATTT ATCGAGAATG GCGGTGGTTA CGTGGGTATT
CATGCGGCAT CAGATACCGA ATACGACTGG GACTGGTACG ATCATATGCT CGGCACCCAT
TTCCGCGATC ACCCACTCTA CCCCGAGCAC ACGCCCGATG CGGAGATCAT TACGGACGTC
AGAAATCACC CGACAACAAA GCACTTACCA GCCAAATTTC ACAAGGCCGA CGAGTGGTAT
AATTTTAAGC AAAGCGTTCG GGGCAAAGAC AGCATTCAGG TCTTGCTAAC CTTGAACGAA
GCTACTTACA AAGCTACTTT CCCAAAGGCG ATGGAAGGCG ACCACCCTAT TTCCTGGACC
AACGTGATTG GGAAAGGGCG TGTGTTCTAC ACCGGTATGG GCCACACCAA CGAAACCTTC
ACCGATAAAT ACGCCATGCC GCATATTGTA GCCGGCATCG AATGGGCCGG GCGGTTCTAG
 
Protein sequence
MLRKLVKILL GIVLVLALLI GGFVTFGMYV TRKLPWQKPI FETTRPADPG QVGPKGVLIF 
SKTNGFRHES IEPGIEALKK VGKEKGWDVR TTENGAFFND DYLSRFKTVV FLSTTGDVLT
PEQEKAFEKF IENGGGYVGI HAASDTEYDW DWYDHMLGTH FRDHPLYPEH TPDAEIITDV
RNHPTTKHLP AKFHKADEWY NFKQSVRGKD SIQVLLTLNE ATYKATFPKA MEGDHPISWT
NVIGKGRVFY TGMGHTNETF TDKYAMPHIV AGIEWAGRF