| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4627 |
|---|
| Symbol | |
|---|
| ID | 8728391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 5629299 |
|---|
| End bp | 5631686 |
|---|
| Gene Length | 2388 bp |
|---|
| Protein Length | 795 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_003389404 |
|---|
| Protein GI | 284039474 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.689235 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCTTA ATTACTTAAA AATCGCCTGG CGGAATCTCC GAAAGGATAA ATTCTACAGC
CTGATCAACA TTCTGGGACT GACCATTGGC GTTACCTGCG GGTTGCTGTT GCTGCTCTAC
GTAACAGACG AACTGAGCTA CGACCGCTAT CATGCCAATG CCTCCCAGAT TTACCGCGTG
GTGTCGCACA TTACCGAGCC GGATAAAGTC AACCGCTGGA GCAGCACGCA GCCGCCGTTA
GTGAAAACGC TGAAGCAGGA TTACCCATTT ATCAAAAATT ACGTCCGGTT CTTTCCTTAC
GGGCGGGTCA TGTTTCGGCA GGGTGAGAAG CGATTTTATG AGGACGATAT CTACGCGGCC
GACTCCACCG TGTTCGATGT GTTCAGTTAT AAATTCATTG AGGGCGATGC CAAAACGGCA
CTTGATCAGC CGGGAAGCGT GGTGCTGACT CAAAAGGCCG CTCAAAAATT CTTTGGTTCC
CGAACCGCGC TGGGACAGTC GCTCCAAACG AACGACACCA CCTTTTACAA AGTAACGGGC
GTGCTGGAAG ATGTGCCGAA GAACTCTCAT TTCACGTTCA ACGCCTTACT GTCTACGGGT
CAGAATGAAC GGAGCCAGGC CACGAACTGG GGTGGTTTTT ACATACTGAG TTACCTTGTT
TTACCCGATA ACTTCGACAC CAAAATCCTT GAAAGCAAGT TCCCGCAGGT GTACGACAAA
TACATAGGGC CGATTTTCAA GCGGATGGGC ATCAAGGTCA CTTACGAGTT ACAGCCGCTG
ACAAGTATCC ACCTTTACTC GAACCTCGAA GGTGAATCCA ATGGAAACAT CGGCTACGTG
TATACCTTCA GTGCGGTGGC GTTTTTCATG CTCTTGCTGG CCAGTATCAA TTACATGAAT
CTGGCCACGG CCCGCTCCGC TAAACGTGCG AAGGAAGTAG GGCTCCGCAA AGTGATGGGC
TCCCTAAGAA GCCGACTGAT GGCGCAGTTT CTGACCGAAT CGGTGCTGAT GACGGTGCTG
GCATTGGGGG CCAGTTTGAT TTTGGTTCTC GTGCTACTGC CTTTTTTCAA TTCTGTTTCG
GGAAAGGATA TACGGTATGG CGAATTGCTG CGTCCCGGTT TCCTGCTTAT TGGTCTGGCG
ATTGTCGTCT TTACGGGATT CATCAGCGGC AGCTATCCGG CCTTTTATTT GTCGGCTTTC
GAACCAGCAG CCGTGCTTAA GGGATCATTC AACACCAAAG GTGGGAGCTT TTTCCGGAAA
GCACTGGTGG TCTCTCAGTT TGCCATCTCG CTGATCATGC TGATTTGTAC CTGGATAGTA
TACAAGCAAC TCAACTTCAT GCGCAACCAC GACCTCGGGT ACGATCAGGA GCAGGTATTG
ACCATCGACT ACCAGGACCG GCAACCGAGG GGCAGTTTCA ATGCCTTGAA AAATACCTTA
CTCGCCAATC CGAACATTCG GGAAGTAGCC TCTGCGTCGG CACCAACCAG CAACATCGGT
GGCCGGGTCA TTTTCGGCGT TGAGTCCAAT ACGGGCTTAA AAGAAATGGG GTTCAAGCCC
ATGAGCGTCG ATTATACGTA CCTGAAAACG ATGGGTATGA AAGTGCTGAA AGGTCGTGAT
TTCTCCGAAA AAACACCGTC CGACACGCTC AACTCGGTCA TTATCAACCA GGCTGTGGTG
GAGCGGATGG GCTGGAAAGA GCCCCTGGGC AAAAAAATCC TACTGGGTGG CTTACCTCAG
GCGGGGCAAC CTGCTCCCCC AACAGCGCAG GTCATTGGTG TAATAAAAGA TTTCCACCAG
CAGTCACTTT ATAACCCTAT TGAACCACTG ATCATGCTGT GCCGACAGGC AAATGGCGTC
GTTCACATCA AGATACAAGC AAAGAATATC GACAAAACGG TCGCGTTTAT CGGTCAGAAA
TGGCGCGAAA CCTATCCCGA CTGTCTGTTT GAATACCGTT TCCTGGACCA GGATTTTGAA
TCGGCCTACC AGGCCGATGA ACTCCGGGGG CGCATATTCA CCACCTTTTC TGCCCTGACC
ATCCTCATTG CCTGCCTGGG TTTATTTGGT CTGGCGACCT TCACGACAGA ACAGCGCGTG
AAGGAGATCG GCGTTCGGAA AGTACTGGGC GCGTCGGTAT CGAGCGTAGT GGTGCTGCTG
TCTAAAGACT TTACCAAACT GGTGCTGTTC TCCTTCCCCA TCGCCATTCC GGTTGCCTGG
TACTCAATGT ACAAATGGCT GCAAAACTTC CCCTACAAGA CCGACATCGG TGTATGGGTT
TTCGTGTTGG CGTGCCTGCT CACCCTGCTC ATTTGCTGGC TGACAGTCAT TTACCAAAGC
GTGAAAGCCG CCCTGATGAA CCCGGTGAAA TCCCTGCGGT CGGAATGA
|
|---|
| Protein sequence | MLLNYLKIAW RNLRKDKFYS LINILGLTIG VTCGLLLLLY VTDELSYDRY HANASQIYRV
VSHITEPDKV NRWSSTQPPL VKTLKQDYPF IKNYVRFFPY GRVMFRQGEK RFYEDDIYAA
DSTVFDVFSY KFIEGDAKTA LDQPGSVVLT QKAAQKFFGS RTALGQSLQT NDTTFYKVTG
VLEDVPKNSH FTFNALLSTG QNERSQATNW GGFYILSYLV LPDNFDTKIL ESKFPQVYDK
YIGPIFKRMG IKVTYELQPL TSIHLYSNLE GESNGNIGYV YTFSAVAFFM LLLASINYMN
LATARSAKRA KEVGLRKVMG SLRSRLMAQF LTESVLMTVL ALGASLILVL VLLPFFNSVS
GKDIRYGELL RPGFLLIGLA IVVFTGFISG SYPAFYLSAF EPAAVLKGSF NTKGGSFFRK
ALVVSQFAIS LIMLICTWIV YKQLNFMRNH DLGYDQEQVL TIDYQDRQPR GSFNALKNTL
LANPNIREVA SASAPTSNIG GRVIFGVESN TGLKEMGFKP MSVDYTYLKT MGMKVLKGRD
FSEKTPSDTL NSVIINQAVV ERMGWKEPLG KKILLGGLPQ AGQPAPPTAQ VIGVIKDFHQ
QSLYNPIEPL IMLCRQANGV VHIKIQAKNI DKTVAFIGQK WRETYPDCLF EYRFLDQDFE
SAYQADELRG RIFTTFSALT ILIACLGLFG LATFTTEQRV KEIGVRKVLG ASVSSVVVLL
SKDFTKLVLF SFPIAIPVAW YSMYKWLQNF PYKTDIGVWV FVLACLLTLL ICWLTVIYQS
VKAALMNPVK SLRSE
|
|---|
| |