Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4613 |
Symbol | |
ID | 8728377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5600126 |
End bp | 5601262 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | SMC domain protein |
Protein accession | YP_003389390 |
Protein GI | 284039460 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0833889 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAT GGAAAAAGAA AATAAGTGTA GTTTTGGGTA TGGATGGGCA ACACACATTA CAATCAATTC ACGTTAGCGG CTTCCGGTCA ATCCAGAGCG TTGACTTGCC AATTCAGGAT CTGAATATTT TGATTGGGCA GAATGGTGCA GGTAAGTCAA ATTTTATAGA GTTGTTTCGC TTTCTGCATG AAATTATCAA CCAGCGCCTA CAAGTTTACA CAGCCGTAAA AGGCGGGGCA GATAAGTTGC TTCATTATGG GAGCCGGGAG ACGAAGCAAA TAAAAATCAT CTTAACCTTT AATGACAGTT GGTACGAATT ATCCTTAATA ATAGCTCAGG ACGATAGGCT TATAATTGAG TTTGAAGAAA CTAATGTCAT TACAGGGCCT ATTACGACAG AGGGAGTTCG TTTTTCGAAG GGAAAAGAAG AGTCACTTTT AACAAAGAAC TCATTCAAAG TCAGTCAGGT GATTAGTGCT CAACTAAAGA ATTGGCGTGT CTATCATTTT CACGATACTA GTGCCGAAGC TCCTGTCAAG AAATTGAGTG ATATAAGCGA CACTGCTTTC TTGCGGGCCG ATGCGGGTAA TCTGGCGGCT TTCCTGTGGT ATATGCAGCA GAAATCACCG AAACACTACG AACGAATTGT CAGTACAATA AAATTGGTAT TGCCTTTTTT TGGTGATTTC ATCTTTCGGC CCAACCCATA CAATGAGCAG AAAATTTTGC TGGAATGGCA GGATAACCGA TCCGATATGC GCTTTAACGC CAGTGACCTT TCTGATGGCT CACTGAGGTT CATCTGTCTG GTAACTTTAC TCCTACAGCC AAAACTACCC AACCTTATAC TTCTGGATGA ACCTGAACTG GGTTTGCACC CGACAGCATT AGCTCTGTTA GCGGGTTTGC TGAAAAAAGC CTCGTCTCGT ACGCAGGTCA TTGTGTCCAC ACAAAGCGTC AATCTGGTCA ATGCCTTCGC GCCCGACGAT GTAATTGTTG TTGATCGTGA AGATGCGGAC GGCCGCCCTG GCCACTCTAC CTTCCGACGA CTGGAGACGG ATGTACTAGC CACCTGGCTT ACCGAGTACA GTTTAGGTGA TCTGTGGGAG AAAAACGTAA TTGGCGGCAC CCCATGA
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Protein sequence | MIKWKKKISV VLGMDGQHTL QSIHVSGFRS IQSVDLPIQD LNILIGQNGA GKSNFIELFR FLHEIINQRL QVYTAVKGGA DKLLHYGSRE TKQIKIILTF NDSWYELSLI IAQDDRLIIE FEETNVITGP ITTEGVRFSK GKEESLLTKN SFKVSQVISA QLKNWRVYHF HDTSAEAPVK KLSDISDTAF LRADAGNLAA FLWYMQQKSP KHYERIVSTI KLVLPFFGDF IFRPNPYNEQ KILLEWQDNR SDMRFNASDL SDGSLRFICL VTLLLQPKLP NLILLDEPEL GLHPTALALL AGLLKKASSR TQVIVSTQSV NLVNAFAPDD VIVVDREDAD GRPGHSTFRR LETDVLATWL TEYSLGDLWE KNVIGGTP
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