Gene Slin_4613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4613 
Symbol 
ID8728377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5600126 
End bp5601262 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content44% 
IMG OID 
ProductSMC domain protein 
Protein accessionYP_003389390 
Protein GI284039460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0833889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAT GGAAAAAGAA AATAAGTGTA GTTTTGGGTA TGGATGGGCA ACACACATTA 
CAATCAATTC ACGTTAGCGG CTTCCGGTCA ATCCAGAGCG TTGACTTGCC AATTCAGGAT
CTGAATATTT TGATTGGGCA GAATGGTGCA GGTAAGTCAA ATTTTATAGA GTTGTTTCGC
TTTCTGCATG AAATTATCAA CCAGCGCCTA CAAGTTTACA CAGCCGTAAA AGGCGGGGCA
GATAAGTTGC TTCATTATGG GAGCCGGGAG ACGAAGCAAA TAAAAATCAT CTTAACCTTT
AATGACAGTT GGTACGAATT ATCCTTAATA ATAGCTCAGG ACGATAGGCT TATAATTGAG
TTTGAAGAAA CTAATGTCAT TACAGGGCCT ATTACGACAG AGGGAGTTCG TTTTTCGAAG
GGAAAAGAAG AGTCACTTTT AACAAAGAAC TCATTCAAAG TCAGTCAGGT GATTAGTGCT
CAACTAAAGA ATTGGCGTGT CTATCATTTT CACGATACTA GTGCCGAAGC TCCTGTCAAG
AAATTGAGTG ATATAAGCGA CACTGCTTTC TTGCGGGCCG ATGCGGGTAA TCTGGCGGCT
TTCCTGTGGT ATATGCAGCA GAAATCACCG AAACACTACG AACGAATTGT CAGTACAATA
AAATTGGTAT TGCCTTTTTT TGGTGATTTC ATCTTTCGGC CCAACCCATA CAATGAGCAG
AAAATTTTGC TGGAATGGCA GGATAACCGA TCCGATATGC GCTTTAACGC CAGTGACCTT
TCTGATGGCT CACTGAGGTT CATCTGTCTG GTAACTTTAC TCCTACAGCC AAAACTACCC
AACCTTATAC TTCTGGATGA ACCTGAACTG GGTTTGCACC CGACAGCATT AGCTCTGTTA
GCGGGTTTGC TGAAAAAAGC CTCGTCTCGT ACGCAGGTCA TTGTGTCCAC ACAAAGCGTC
AATCTGGTCA ATGCCTTCGC GCCCGACGAT GTAATTGTTG TTGATCGTGA AGATGCGGAC
GGCCGCCCTG GCCACTCTAC CTTCCGACGA CTGGAGACGG ATGTACTAGC CACCTGGCTT
ACCGAGTACA GTTTAGGTGA TCTGTGGGAG AAAAACGTAA TTGGCGGCAC CCCATGA
 
Protein sequence
MIKWKKKISV VLGMDGQHTL QSIHVSGFRS IQSVDLPIQD LNILIGQNGA GKSNFIELFR 
FLHEIINQRL QVYTAVKGGA DKLLHYGSRE TKQIKIILTF NDSWYELSLI IAQDDRLIIE
FEETNVITGP ITTEGVRFSK GKEESLLTKN SFKVSQVISA QLKNWRVYHF HDTSAEAPVK
KLSDISDTAF LRADAGNLAA FLWYMQQKSP KHYERIVSTI KLVLPFFGDF IFRPNPYNEQ
KILLEWQDNR SDMRFNASDL SDGSLRFICL VTLLLQPKLP NLILLDEPEL GLHPTALALL
AGLLKKASSR TQVIVSTQSV NLVNAFAPDD VIVVDREDAD GRPGHSTFRR LETDVLATWL
TEYSLGDLWE KNVIGGTP