Gene Slin_4552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4552 
Symbol 
ID8728316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5519136 
End bp5520107 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content54% 
IMG OID 
Productaldo/keto reductase 
Protein accessionYP_003389331 
Protein GI284039401 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.569712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTATC GTACATTTGG CCGGACAGGC TGGAACATCT CCGAAATTGG CTACGGCATG 
TGGGGCCTGG CTGGCTGGAC CGGGTCCGAC AAAGCTGAAG TTTTACGCGC CCTCCAGCGC
TCTGTAGAAC TGGGTTGCAA CTTTTTTGAT ACGGCCTGGG CCTATGCCGA CGGTGTCAGT
GAAGAAATCC TCAATCAACT GCTTAAAAAT AACCCCGATA AGCGGTTGTA CGGCGCCACC
AAGATTCCCC CCAAAAACCG GCAGTGGCCC TCGAAAGCAG GCTCTAAGCT GGAAGACGTT
TTCCCGGCCG ATTACATTGT TGAATACACC GAAAAAAGTC TGAAGAACCT CGGCGTCGAC
ACCATCGACC TGCAGCAGTT TCACGTTTGG GAAGACAGCT GGGCCGATCA GGACGAATGG
AAAGAAGCCA TTATGAAGCT GAGTGAACAG GGTAAAGTGC GGGCGTGGGG ACTGTCGGTA
AACCGCTGGG AGCCGGACAA CAGCCTCAAT ACCATTCGCA CGGGGTTGAT TGACGCCGTA
CAGGTTATTT ATAACATCTT CGACCAGAAC CCCGAAGACA ACCTGTTCCC CCTCTGCCGC
GAGATGAACG TGGGCATCAT TGCCCGTGTC CCCTTCGATG AAGGAACACT GACGGGAACC
TTCACGAAAG AAACGACCTT CCCAGCCAAT GACTGGCGGT CGACGTATTT CGTGCCCGAA
AACCTCAATA GCAGTGTCGA CCATGCCGAT GCCCTGAAGC CGCTTCTTTC AGACGGCATG
ACCATGCCCG AAATGGCCCT TCGGTTCATT CTGAGCAATC CGGACGTACA CACGACCATT
CCGGGAATGC GCCAGATTCG CAATGTAGAA GCCAATACTT CCACCAGTGA CAAAGGACCT
TTATCGCCCG AGTTGCTGCA AGAATTAAAA GGCCACCGCT GGGACCGTAC CCCAACCGAG
TGGAGTCAGT AA
 
Protein sequence
MKYRTFGRTG WNISEIGYGM WGLAGWTGSD KAEVLRALQR SVELGCNFFD TAWAYADGVS 
EEILNQLLKN NPDKRLYGAT KIPPKNRQWP SKAGSKLEDV FPADYIVEYT EKSLKNLGVD
TIDLQQFHVW EDSWADQDEW KEAIMKLSEQ GKVRAWGLSV NRWEPDNSLN TIRTGLIDAV
QVIYNIFDQN PEDNLFPLCR EMNVGIIARV PFDEGTLTGT FTKETTFPAN DWRSTYFVPE
NLNSSVDHAD ALKPLLSDGM TMPEMALRFI LSNPDVHTTI PGMRQIRNVE ANTSTSDKGP
LSPELLQELK GHRWDRTPTE WSQ