Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4507 |
Symbol | |
ID | 8728271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5465018 |
End bp | 5466094 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | oxidoreductase domain protein |
Protein accession | YP_003389286 |
Protein GI | 284039356 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGAAC CCATACGCAT TGCCATTATT GGCCCCGGTA AAGTGGCACA TCTGCACGCC AAAGCCGCTT TGGAAATTCC CAATGCCGAA CTAGTCGCCG TTTACGGCCG AACCTATCAA AAAGCGGAAG ACTTCGCCAA TCAGTATGGC ATTCGTGCCT ACAGCGACAT CTACGACATG GTCGACCGGG AGAACGTCGA CCTGTGTCTG GTCTGCACTA CCCACCCCGG CCACCGGGAG CCAACCGTAG CGGCCCTGAA TGCCGGTTCG CACGTGCTGG TCGAGAAACC GCTGGCATCG TCGCTGGAAG ACTGCGATGC CATGCTCGAA GCCGCCAAAC GCAACAATCG CCACCTGGGT GTTATCAGCC AACGGCGGTT TTACGCGCCC AGTCAGCGCA TTCGGGAAGC AATTGATACC GGAAAAATAG GCAAGCCCGT GCTCGGTACG GTTCAGATGC TCGGCTGGCG GGATGAGAAC TATTACAAAA GCGACGCCTG GCGCGGTACC TGGGCCGATG AAGGCGGGGG CGTATTGGTC AACCAGTCGC CCCACCAACT CGATTTGCTG CTCTGGTACA TGGGCGAAAT CGACGAGGTA TTTGGTGTCT GGCGTAACCT GAACCATCCG TATATTGAAG TGGATGATAC AGCTTTGGCC ATTGTCAAAT TTAAGAATGG CGGGCTTGGC AACATCATCG TGAGTAACTC ACAAAAGCCG GGTATTTTCG GGAAAGTACA CGTACATGGC CAGAATGGTG CATCGGTCGG CGTTCAGACC GATGGTGGGG CCTTATTCAT TGCGGGTATG TCGAGCATTA CCGACCCGCC AGTCAATGAC CTCTGGACGG TACCCGGCGA AGAAGCCTTA CTGGCTAAAT TTGTTGAAGA AGATACCGCT TTCTTCAACA CCATCGACGC CACGGTCTAT TACTTCGGTC TACAAATCGC CGAGTTCTGC GACGCCATAC GCGAAGGCCG CGCCCCCGCC GTAACCGGAG AAGAAGGCCG GAAAGTAGTT GCCCTCTTTC AGGCCATTTA TGAATCAACC CGAACGGGTT TGCCGGTTAA ACTGTAA
|
Protein sequence | MPEPIRIAII GPGKVAHLHA KAALEIPNAE LVAVYGRTYQ KAEDFANQYG IRAYSDIYDM VDRENVDLCL VCTTHPGHRE PTVAALNAGS HVLVEKPLAS SLEDCDAMLE AAKRNNRHLG VISQRRFYAP SQRIREAIDT GKIGKPVLGT VQMLGWRDEN YYKSDAWRGT WADEGGGVLV NQSPHQLDLL LWYMGEIDEV FGVWRNLNHP YIEVDDTALA IVKFKNGGLG NIIVSNSQKP GIFGKVHVHG QNGASVGVQT DGGALFIAGM SSITDPPVND LWTVPGEEAL LAKFVEEDTA FFNTIDATVY YFGLQIAEFC DAIREGRAPA VTGEEGRKVV ALFQAIYEST RTGLPVKL
|
| |