Gene Slin_4497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4497 
Symbol 
ID8728261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5452068 
End bp5452529 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content48% 
IMG OID 
Productprotein of unknown function DUF1232 
Protein accessionYP_003389276 
Protein GI284039346 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.923848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACA AAAGTCTTAT TTCGAGGATT TTAACGTCTA TTTTCTTTAA ACGAGCCAAC 
GTAGGCGCTG TTCGATACGC CCGTAACTCC CGGAGTCTTT ACCAGTTAAT TCGGGATGCG
CTGGATAAAA GCGGTGGCTT GTCGGGCAAC AACATAGCCG CCTTTCGTGA GCAACTGGGC
ATTGTAACAC GTCTGCTAAA AGCTTATGCC TCGGGAGACT ATCGCCAGTT ACCCTGGAAA
ACTCTGATCC GGGTTATTGC CGTACTTATC TATTTTGTGT CGCCAATCGA CATCCTTCCC
GACTTCCTGC CAATTGTGGG TTTGACGGAC GATATAGCAC TGATGCTCTG GCTCTTTAGC
GGTATAAAAG ATGATATTGA GAAGTTCCGC CAGTGGGAAC AAACGACGGC CGCTGCGGGT
GAAATGACAA CCCAGCCGGT CAAAACTATT AAGATTGGGT GA
 
Protein sequence
MANKSLISRI LTSIFFKRAN VGAVRYARNS RSLYQLIRDA LDKSGGLSGN NIAAFREQLG 
IVTRLLKAYA SGDYRQLPWK TLIRVIAVLI YFVSPIDILP DFLPIVGLTD DIALMLWLFS
GIKDDIEKFR QWEQTTAAAG EMTTQPVKTI KIG