| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4492 |
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| Symbol | |
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| ID | 8728256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5443517 |
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| End bp | 5444884 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003389271 |
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| Protein GI | 284039341 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.685781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGCA TGAAGCAAAC TACCCTGATG CTGCTGATGC TGAGCGTACT GGCTACGTTG
ACCAGCGCAC AGACGGCACC CCCGGGAGGG TTTACGCTCG CCCAGTGCGT TGAGTATGCA
CGGGCCAATA ATCCGACTAT TAAAATAGCG CGGGTCAATG AGCAAATATC GCTCGCCCAG
ACACAGCAAG TTATCGGGCG AAATCTCCCA CAGGTTGGGA TATCCGGATC AGTGCTCGAC
AACGTCAAAA TTCCAGTGCA GTTGTTGCCC GGCGAGTTCT TTGGTCAACC CGGCACCTTT
TTGCCCGTTC AATTTGGTAC CCAGTATAGC TCCACGCTAA CAGGTCGGGT CGATCAGAAA
CTCTTCGATC CTTCTTTTGG ACTGGCCCTG AAAGCGGCCA AAATTTCGAC CCAGGTACAG
GCACAGGCTA CGCTACAGGC GGAACAAACC CAGGCTTACA ACATTGCTAA CGCCTATTAC
CAGACACTGG TCATTGATTT ACAGCGACGC CTGACTATTC GTAACCTGAA TTCGTCGGAT
ACGCTGTTGC AGCAGGAACA GGTACGACTG AAGAACGGCA CAACCCGCGA GATTGACTTT
GGGCGTATCC AACTGAACCG AAACAACTTA CAGTCGCAGC TGGAGCAGGC AAACCGAAGC
TACGAGCAGG CTATCAACCA ATTGAAATAC CAGATGGGAA TGCCTCTCAA TGAAACGCTG
GCCCTTCAGC CGCTGGAAAT TGAAAAAGAG TTGCAGGTAA ATGAGTTGCC CTCGGCCGAC
AGCCGCTTTT TCGAGAACCG GCCCGATTTC CGCCAGTTAG TTTTGAACAC CCAGCTACAG
GACCTTAATC GGCAGTCGAA TAACCGGGGT TATTTTCCGT CATTGGGTCT TTACGGCACT
TATGCGACCA ACGCCCAGCG GCAAACGTTC AGCTTTTTCG ACGGAAGTTT ACCCTGGTTC
AAAAGCTCGA CCATAGGCCT AACCCTCAAC TGGACACCGT TTGACGGGAA CCAGCGTAAA
TATCGCGACC GGGAAAACCG GCTGAATCTG GAAACGCTGC GGCTCCAGCA GATTCTGGCG
CGCGAGTCGG CGCAGTTGAG TTTGAGCAAC GCACAGGTCA GTTACCAGAA TCTGGTCATC
GATATTCAGC GCGAACGCGA TAACATCGAA CTGGCCCGCA AAATTCTGTC CGTTACCGAA
CTCGAATACC GGGAAGGAAT TGCGACATCC GTCACGCTGA TTGATGCCAA AGATGCTCTG
ACTACGGCCC AGAACAATTT GGCCAATCGA CTCATTAGTC TGTATCAGGC ACGTTTAGAT
TACGAAAATT CACAGGGAAC TATTCTTCAA TACGTCACTC AAAAATAA
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| Protein sequence | MKGMKQTTLM LLMLSVLATL TSAQTAPPGG FTLAQCVEYA RANNPTIKIA RVNEQISLAQ
TQQVIGRNLP QVGISGSVLD NVKIPVQLLP GEFFGQPGTF LPVQFGTQYS STLTGRVDQK
LFDPSFGLAL KAAKISTQVQ AQATLQAEQT QAYNIANAYY QTLVIDLQRR LTIRNLNSSD
TLLQQEQVRL KNGTTREIDF GRIQLNRNNL QSQLEQANRS YEQAINQLKY QMGMPLNETL
ALQPLEIEKE LQVNELPSAD SRFFENRPDF RQLVLNTQLQ DLNRQSNNRG YFPSLGLYGT
YATNAQRQTF SFFDGSLPWF KSSTIGLTLN WTPFDGNQRK YRDRENRLNL ETLRLQQILA
RESAQLSLSN AQVSYQNLVI DIQRERDNIE LARKILSVTE LEYREGIATS VTLIDAKDAL
TTAQNNLANR LISLYQARLD YENSQGTILQ YVTQK
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