Gene Slin_4489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4489 
Symbol 
ID8728253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5439426 
End bp5439935 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389268 
Protein GI284039338 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0109941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.397538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCAAC GCGTTCAAAC GATATTTTTG TTTCTTATTG TCGTTGCCAT GGGCATCGCA 
CTCAGTAATC CGATCTGGGA AAAAGTAGGT ACTCAATCGC TCGAAACGGC TAAACTAACC
GCTTTACAGT ATACCCAGCA AAAAACAGTT GCCCCACAGG CGGGCGTTCC AACCCAATCA
GTTCCTGTTA CCTTCGAAGT ATCCGTCTGG TATTTAGGCT TGTTGCTGGG TTTAGTTGCG
GTATCATCTC TGTACGCTAT TTTTCAGTTT AAAAATCGGC TCACGCAAAC GGCTTTGTGT
GCAGTAAACG CCCTGATGCT GACCGCCATT ATGGGTATTA TACTCTACCG GACGTTATAC
GCTGGAAAGG AATTTGGCAA CCCTGCCGAT CAGGGAACGT TTCTCATTGG CTTCTACGCG
ATTGTGGGTG CCCTGCTTTT CAATGCACTC GCTAACCGAT TCATTCGTCG GGATGAAAAG
CTGGTACGAG GGTCAGACCG CCTGCGCTAG
 
Protein sequence
MIQRVQTIFL FLIVVAMGIA LSNPIWEKVG TQSLETAKLT ALQYTQQKTV APQAGVPTQS 
VPVTFEVSVW YLGLLLGLVA VSSLYAIFQF KNRLTQTALC AVNALMLTAI MGIILYRTLY
AGKEFGNPAD QGTFLIGFYA IVGALLFNAL ANRFIRRDEK LVRGSDRLR