| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4477 |
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| Symbol | |
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| ID | 8728237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5425694 |
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| End bp | 5429509 |
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| Gene Length | 3816 bp |
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| Protein Length | 1271 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase, beta subunit |
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| Protein accession | YP_003389256 |
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| Protein GI | 284039326 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTGGGT ATCCAGACTT TCTGGATATT CAAGTAAAAT CCTTCAAAGA TTTTTTCCAG
CTTGACACTC CCTCCAACCA ACGGTCGGAG GAAGGCTTGT TCAAGGTATT CCAGGAAAAT
TTCCCCATTT CAGACTCCCG TGAAAACTTC AAGCTGGAGT TCATCGACTA TCTGGTTGAT
CCCCCGAAGT ACTCGGTTGA CGAGTCTATC GACCGGGGTT TGACGTATTC GGTGCCTTTG
AAAGCCAAAC TGCGTCTGAC AAACAATGAC CCCGACAACG AGGACTTTGA GACTATTGAG
CAGGAGGTGT TCTTAGGGAA CATTCCGTAT ATGACCGAGA AAGGCTCGTT TGTCATCAAC
GGAGCCGAAC GTGTGATTGT TTCTCAATTG CACCGTTCGC CAGGGGTGTT CTTTTCAATG
AGCAAACACA CGAATGGGAC CAAGCTGTAT TCAGCGCGGA TTATTCCATT CAAAGGCTCA
TGGATCGAAT TCTCAACCGA CGTTAATAAT GTCATGTACG CGTACATCGA CCGGAAAAAG
AAGTTCCCGG TTACTACGCT TTTACGTGCT ATCGGCTTCG GTTCGGATAA GGACATTCTT
GACCTGTTCG GTTTATCGGA AGAAGTACCG GCAACGCCTG CCAACCTGAA AAAGGCCATT
GGCCGTCGGT TAGCGGCTCG GGTACTGCGC ACGTGGACGG AAGACTTTGT GGATGAAGAT
ACGGGCGAAG TAGTATCAAT CAGCCGGAAC GAGGTGCTCC TGGAGCGCGA CTCGGCCATT
TCGGCGGATG ACATTGATGT AATTACGGAA TCAGGTCAGA AATCAGTCAT CCTGCACAAG
GAAGACATGA ATATGGCCGA TTACAACATT ATTTACAACA CGCTGCAGAA AGATAGCTCC
AACTCTGAAA AAGAGGCTGT GGAGCAAATC TATCGGCAGC TTCGGAACGC TGATGCACCT
GACGAGCAAA CCGCTCGGGA GATCATCCAA AGCTTGTTCT TCTCGGATAA GCGGTATGAC
CTTGGTGATG TAGGCCGTTA CCGGATCAAC AAAAAACTCG GTCTTGACAT TTCGTCGGAC
ATGAAAGTAC TGACCACAGA AGACATTGTG TCGATTGTGA AGTACCTGAT TGGTCTGATC
AACTCAAAGG CCGTTGTCGA TGACATTGAC CACCTCAGCA ACCGACGTGT TCGGACAGTA
GGGGAGCAAT TATATGCACA GTTCGGCGTC GGTCTGGCTC GTATGGCCCG GACGATTAAA
GAACGGATGA ACGTACGGGA CAACGAGGAT TTTAAACCTG TTGACCTGAT CAATGCCCGG
ACGCTTTCGT CGGTCATTAA CTCGTTCTTC GGTACTAACC AGCTGTCGCA GTTTATGGAC
CAGACCAATC CGCTGGCCGA AGTGACGCAC AAGCGTCGTA TGTCGGCACT CGGGCCCGGT
GGTCTGTCGC GTGAGCGGGC TGGTTTCGAA GTTCGTGACG TACACTACAC GCACTACGGT
CGTCTGTGTA CTATCGAAAC GCCGGAAGGT CCAAACATTG GTCTGATCTC GTCGCTTTGC
GTCTATGCTA AAATCAATAG CATGGGCTTC ATTGAGACGC CGTACCGGAT CATTGAAAAC
GGAAAGGTAT CGATGGATAA GCCGGTCATG TATCTGACAG CTGAAGAAGA AGATACCCAT
TACATTGCCC AGGCCAACGC AGGCATCGAC AAGAAAGGTA ATTTTCAGGT AGATCGCCTG
AAAGCCCGTT TTGAAGGTGA CTTCCCAATG GCTGAACCGG CTAACGTAAC CTTTATGGAT
ATCGCCCCGA ACCAGATTGT ATCGGTGGCA GCTTCCATGA TCCCGTTCCT TGAGCACGAC
GATGCTAACC GCGCCCTGAT GGGTTCGAAC ATGCAGCGTC AGGCAGTGCC GCTCCTTCGT
CCTGAAGCCC CAATCGTGGG TACAGGTCTG GAAGGCCGCG TTGCTGTTGA CTCGCGTACA
CTGGTTATTG CTGAAGCCGA TGGTGTTATT GAGTTTGTTG ACTCAACCAA AATCATCGTT
AAGTACAACC TCGACGAAGA TCAGATGGCG GTTACCTTCG ATGAAGATCG GAAAACGTAC
AACCTCATCA AATTCCGGCG GACAAACCAG GATACATGCA TCAACATCAA ACCAACTGTA
CTGAAAGGGC AGCGGGTGAA GAAAGGTGAT GTACTGTGCG AAGGCTATGC CACGCAGGCT
GGCGAGCTGG CTTTGGGCCG GAACATGAAA GTAGCGTTCA TGCCCTGGCA GGGATATAAC
TTTGAGGATG CTATCGTGAT TTCGGAGCGC GTTGTGCGTG AAGATATCTT CACCTCAATT
CACATTGAAG AGTTTGAACT GGAAGTTCGT GACACCAAGC GGGGCGAAGA GGAATTAACC
TCCGAAATCC CGAACGTAAG CGAAGAAACG GTTCGTAACC TCGATGAGAA CGGTATCGTT
CGCGTGGGTA CGGAAGTGAA GGAAGGCGAT ATACTGATCG GTAAGATTAC ACCGAAAGGC
GAAAGCGATC CAACACCGGA AGAAAAACTT CTCCGTGCTA TTTTCGGTGA TAAAGCCGGC
GACGTGAAAG ATGCTTCCAA AAAAGCACCG CCATCCCTCA AAGGTGTCGT TATTGATACC
AAGTTGTTTG CCCGTCCGGC CAAAGAAGAC CGGGGTAAGC ACAAAGACGA GGTTAAAGCA
CTGATGAAAA AATACGGCCG TGAGTTGAAT GACTTCCGTG CCCGTATGAT TGAGAAGCTG
GTCGCTTTGC TGGATGGTAA AACCAGCGCG GGTGTCAAAC ACAAGTTTGG CGATGAAATT
GTGAGCAAGG GTGTGAAGTT CAGCCGTAAG AATATTACGG AAAACCTCTT CCCCGATCGC
AATGCCTACC GCGATGAAAG CAGTTACGCT GTGCCGGAAG AAGCCAACCT GTTGTCGGAC
ATGAACCTTG AAGGTTGGAC GGACGATGAG AAGGTGAACA TGATGGTTGT CGAACTGGTG
AAGAGCTACA ACAACCGTCG TAGCGAAATC ACGGGTCGGT TCAAGCGTGA ACGGTTTACC
CTCGAAGTTG GTGACGAATT ACCAGCCGGT ATCGTGAAGC TGGCCAAAGT TTATATCGCC
AAGAAGCGGA AGCTGAAAGT AGGGGATAAA ATGGCCGGTC GCCATGGTAA CAAAGGGGTT
GTTGCCCGGA TTGTGCGGGA TGAAGACATG CCGTTCCTGG AAGATGGAAC GAAAGTGGAC
ATCGTGCTTA ACCCGCTTGG TGTACCTTCC CGGATGAACC TCGGCCAAAT CTATGAAACT
GTACTGGCCT GGGCTGGTCA GAAACTGGAT CGGAAGTATG CAACGCCAAT TTTCGATGGC
GCAACGGAGC AACAAGTAGC AGACGAGTTG AATGAAGCCG GTTTGCCTTC ATTCGGCCGT
ACATACCTCT ACAACGGACT AACGGGTGAT CGTTTCGACC AGCCGGTAAC CGTAGGTATC
ATCTACATGC TTAAACTCGG CCACTTGGTC GACGATAAGA TGCACGCCCG TTCGATCGGA
CCCTACTCGC TCATTACACA GCAGCCGCTG GGTGGTAAGG CGCAGTTTGG TGGTCAGCGT
TTCGGTGAGA TGGAAGTGTG GGCGCTGGAA GCCTTCGGTG CTTCGAACAT CCTGCAGGAA
ATTCTGACCG TAAAATCGGA TGACGTTGTT GGTCGTGCGA AGGCATACGA GGCTATCGTA
AAAGGTGAGA ACCTGCCGAA GCCAAACATT CCGGAGTCGT TCAACGTACT CGTACACGAG
TTGCGCGGTC TTGCACTTGA AATTACACTT GAATAA
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| Protein sequence | MIGYPDFLDI QVKSFKDFFQ LDTPSNQRSE EGLFKVFQEN FPISDSRENF KLEFIDYLVD
PPKYSVDESI DRGLTYSVPL KAKLRLTNND PDNEDFETIE QEVFLGNIPY MTEKGSFVIN
GAERVIVSQL HRSPGVFFSM SKHTNGTKLY SARIIPFKGS WIEFSTDVNN VMYAYIDRKK
KFPVTTLLRA IGFGSDKDIL DLFGLSEEVP ATPANLKKAI GRRLAARVLR TWTEDFVDED
TGEVVSISRN EVLLERDSAI SADDIDVITE SGQKSVILHK EDMNMADYNI IYNTLQKDSS
NSEKEAVEQI YRQLRNADAP DEQTAREIIQ SLFFSDKRYD LGDVGRYRIN KKLGLDISSD
MKVLTTEDIV SIVKYLIGLI NSKAVVDDID HLSNRRVRTV GEQLYAQFGV GLARMARTIK
ERMNVRDNED FKPVDLINAR TLSSVINSFF GTNQLSQFMD QTNPLAEVTH KRRMSALGPG
GLSRERAGFE VRDVHYTHYG RLCTIETPEG PNIGLISSLC VYAKINSMGF IETPYRIIEN
GKVSMDKPVM YLTAEEEDTH YIAQANAGID KKGNFQVDRL KARFEGDFPM AEPANVTFMD
IAPNQIVSVA ASMIPFLEHD DANRALMGSN MQRQAVPLLR PEAPIVGTGL EGRVAVDSRT
LVIAEADGVI EFVDSTKIIV KYNLDEDQMA VTFDEDRKTY NLIKFRRTNQ DTCINIKPTV
LKGQRVKKGD VLCEGYATQA GELALGRNMK VAFMPWQGYN FEDAIVISER VVREDIFTSI
HIEEFELEVR DTKRGEEELT SEIPNVSEET VRNLDENGIV RVGTEVKEGD ILIGKITPKG
ESDPTPEEKL LRAIFGDKAG DVKDASKKAP PSLKGVVIDT KLFARPAKED RGKHKDEVKA
LMKKYGRELN DFRARMIEKL VALLDGKTSA GVKHKFGDEI VSKGVKFSRK NITENLFPDR
NAYRDESSYA VPEEANLLSD MNLEGWTDDE KVNMMVVELV KSYNNRRSEI TGRFKRERFT
LEVGDELPAG IVKLAKVYIA KKRKLKVGDK MAGRHGNKGV VARIVRDEDM PFLEDGTKVD
IVLNPLGVPS RMNLGQIYET VLAWAGQKLD RKYATPIFDG ATEQQVADEL NEAGLPSFGR
TYLYNGLTGD RFDQPVTVGI IYMLKLGHLV DDKMHARSIG PYSLITQQPL GGKAQFGGQR
FGEMEVWALE AFGASNILQE ILTVKSDDVV GRAKAYEAIV KGENLPKPNI PESFNVLVHE
LRGLALEITL E
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