Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4461 |
Symbol | |
ID | 8728221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5403116 |
End bp | 5403850 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | peptidase M15D vanX D-ala-D-ala dipeptidase |
Protein accession | YP_003389240 |
Protein GI | 284039310 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.611903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAATG GTAAAAAAGT TAAGCCCCAG AGAGGCCCGG AGAAAACACA GAGATACACA AAGGTTTTTC CCCGTGTATC TCTGTGGCTC TTTGTGTATC TCTGTGGCTT AACCCTCAAA GCACAGGATT TCGAAGCCGC TATGGCCAAA CAGGGCCTTG TCGACATACA GAAAGTGGAC CCAGCTATTC TAGTCGAACT CAAATATTCC ACAACCGACA ATTTTGTGGG CAAAGACGTG TACGGCGACC TGACGAGGGC GTTTATGCAA CCGATGGCCG CTAAAAAACT GGCCGCTGCC AGTAAGTACC TACAGGCACA TCATCCAAAT CTGCGTCTTC TGGTTTATGA TGCGGCCCGC CCCCGCTCGG CGCAGTGGAA ACTCTGGAAC GCCCTGCCTG AACTACCCGA AAATGAACGC CAGAAATACG TAGCCGACCC ACGAAAGGGC TCTATTCACA ACTACGGCTG CGCGGTCGAC TTAACCGTTG CTACAGCCGA TGGAAAAGCA CTGGATATGG GGACTAAATA CGATTTCTTC GGCGAACTAG CGTACCCCTC CCGCGAAAAA GAACTCCTGC AAACCGGCAA ATTAACACAG CAGCAGATCG ACAACCGTCA GATTCTGCGC ACGGCCATGC GCCAGGGCGG CTTCAGCCCT ATTGAGTTTG AATGGTGGCA TTTCAACGCG TTGTCGAGGG AGAAAGCCAA GATGGCATTT CGCATCGTGG ACTAA
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Protein sequence | MMNGKKVKPQ RGPEKTQRYT KVFPRVSLWL FVYLCGLTLK AQDFEAAMAK QGLVDIQKVD PAILVELKYS TTDNFVGKDV YGDLTRAFMQ PMAAKKLAAA SKYLQAHHPN LRLLVYDAAR PRSAQWKLWN ALPELPENER QKYVADPRKG SIHNYGCAVD LTVATADGKA LDMGTKYDFF GELAYPSREK ELLQTGKLTQ QQIDNRQILR TAMRQGGFSP IEFEWWHFNA LSREKAKMAF RIVD
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