Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4433 |
Symbol | |
ID | 8728193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5371766 |
End bp | 5372503 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | undecaprenyl diphosphate synthase |
Protein accession | YP_003389213 |
Protein GI | 284039283 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0578119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.595421 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGAAC ATATTGACCC GAGCAATCTA CCCCAGCACA TAGCCGTTAT CATGGACGGG AACGGACGTT GGGCAAAACG GCAGGGCCTT GCCAGGGTGT TTGGCCACAA CAGCGCCATA AAGGCCGTAC GTGAAGTGAC GGAAGGATGC GCTGAATTGG GTGTAAAATA CCTGACTCTT TACGCTTTTT CAACCGAGAA CTGGAATCGC CCTAAATACG AGGTAGACGC GTTGATGACG CTGCTGGTTC GCACCATACG GGGAGAAATC AAGACGCTGA TGGACAACAA CGTGCGGCTG GCAACTATTG GCCACACGGA AAGTTTGCCC GGCGACTGCC AGCGCGAGTT GGCCGAAGCC ATGCGTGAAA CCAGCCAGAA TACCGGTTTA ACGCTTGTTT TGGCGTTAAG CTACAGTGGC CGCTGGGAGA TTCTGGAGGC AGCCAGACAA CTGGCCGCTG ATGTACGCGA TGGCAAACTG ACACCGGATC AGATTGATGA AACCACCTTT GGTCAGCATC TTTCCACGAA GGGTATACCC GACCCCGAAC TGATGATCCG AACTAGTGGT GAAATGCGTA TCAGTAACTT TATGCTGTGG CAACTGGCTT ACTCCGAGTT GTATATGCCT GATGTGCTCT GGCCCGATTT CCGTAAGGAA CATTTGTATA ATGCCATAGT GAGTTACCAG CAGCGTGAAC GGCGGTTTGG AAAAACCAGT GAACAATTGG TCAAGTAG
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Protein sequence | MKEHIDPSNL PQHIAVIMDG NGRWAKRQGL ARVFGHNSAI KAVREVTEGC AELGVKYLTL YAFSTENWNR PKYEVDALMT LLVRTIRGEI KTLMDNNVRL ATIGHTESLP GDCQRELAEA MRETSQNTGL TLVLALSYSG RWEILEAARQ LAADVRDGKL TPDQIDETTF GQHLSTKGIP DPELMIRTSG EMRISNFMLW QLAYSELYMP DVLWPDFRKE HLYNAIVSYQ QRERRFGKTS EQLVK
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