| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4399 |
|---|
| Symbol | |
|---|
| ID | 8728159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 5335325 |
|---|
| End bp | 5336143 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | 3-methyl-2-oxobutanoatehydroxymethyltransferase |
|---|
| Protein accession | YP_003389179 |
|---|
| Protein GI | 284039249 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTTC ATAATCCCGA TATCAAACGC GTTACGACGC ATACAATTCA GGAACTGAAG
AATAAAGGCG AGAAAATATC GGCATTAACC GCCTATGACT ACTCCATGGC CAAGGCGGTC
GATGCCGCCG GAGTGGAGCT GATATTAGTA GGCGACTCGG CCTCCAATGT TATGGCTGGC
CACGAAACAA CGCTGCCCAT CACCCTCGAC CAGATGATCT ATCACGCCTG TTCGGTGGTG
CGGGGTGTTA AGCGGGCTCT GGTGGTGGTC GACCTACCCT TTGGTTCTTA CCAGGGTAAC
TCAACGGAAG CCCTGCGGTC GGCCATTCGG ATCATGAAAG AATCGGGTGC CCATGCCGTA
AAAATGGAAG GCGGGCTGGA AATCAAAGAA TCTATTGTCC GGATTTTAAG CGCGGGCGTA
CCCGTCATGG GGCATCTGGG CCTGACACCC CAGTCCATTT ACAAGTTTGG TACCTACGCC
GTACGCGCCA AAGAAGAAGC CGAAGCCCAG AAGTTGATCG ACGATGCACA CATGCTTGAA
GATATTGGCT GTTTCGGGCT GGTACTCGAA AAAATCCCGG CGGCATTGAC CAAAACAGTT
TCGGAAAGCC TTACCATTCC AACGATTGGT ATTGGTGCTG GCCCCGACGC CGATGGGCAG
ATTCTTGTTG TTCATGACCT GCTTGGCATC ACTAATGAAT TCAAGCCCCG GTTTTTGCGC
CGGTACGCCG ATCTGCATAA AATCATGACC GAGGCCATCG CTCATTACGT AGACGATGTG
AAAACCAACG ACTTCCCGAA CGAGAAAGAA GCGTATTGA
|
|---|
| Protein sequence | MSVHNPDIKR VTTHTIQELK NKGEKISALT AYDYSMAKAV DAAGVELILV GDSASNVMAG
HETTLPITLD QMIYHACSVV RGVKRALVVV DLPFGSYQGN STEALRSAIR IMKESGAHAV
KMEGGLEIKE SIVRILSAGV PVMGHLGLTP QSIYKFGTYA VRAKEEAEAQ KLIDDAHMLE
DIGCFGLVLE KIPAALTKTV SESLTIPTIG IGAGPDADGQ ILVVHDLLGI TNEFKPRFLR
RYADLHKIMT EAIAHYVDDV KTNDFPNEKE AY
|
|---|
| |