| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4383 |
|---|
| Symbol | |
|---|
| ID | 8728143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 5318308 |
|---|
| End bp | 5319570 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003389163 |
|---|
| Protein GI | 284039233 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00326845 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.997814 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA ATCTCCGCTG GCTGATCGTT TCATTACTCT TCGTGGCTAC TGGCCTAAGC
TTTCTGGATC GGCAGGTGCT GTCCATTGCC ATCATCAAAA TTCAACAGGA GTTTCATATT
ACAGACGTAC AATACGGACT GATCAACACC AGCTTTCTGA TCAGTTATGC GATTATGTTC
ACCCTGGGTG GCTGGCTGAT CGATCGGGTG GGAGGTAAAC TGGGACTGGC CATCTCGGTC
GGCTTGTGGT CGGTGGCCAA TAGCCTGCAC GCGGTGATGA CTACTTTCTC GCAGTTGCTG
GCCTTCCGGT TTCTGCTGGG CATGGGCGAA GGCGGCTGTT TTCCGGGGGC TGCCTGGACG
GTTTACCGGT GGTTCGATAA GGAAGAACGC GCCCTGGCGA ACGGGATAGC TATTGGTGGT
TCGGCCATTG GTGCCGTGAT TGCACCCCCT TTAACCATCT GGTTGTCTAC AAATTATGGC
TGGCGGGGCG GTTTTTTAAT CCCCGGCCTG ATTGGTATTG TCTGGGTAAT TGTCTGGCTA
TTAACGCCCT GGAGAAAAGA AAATCTGGCT GCTGAACAAC CGCTGGCCTC TTCGGTCGGA
AAGACGGTTC CTTTTCTGGA TTTGCTCAAA CTACGGCCGA CCTGGGTGTT TATCCTTATC
CGGTTCCTGC TCGATCCTGT GTTCTACTTC ATGATGTTCT GGATTCCGAA ATACCTGAGT
ACAGAACGCA ATGTGTCCTT CGAAGCGATT GGGAAATTGT TCTGGATACC CTTTTTAGCC
CTTGGTATCG CTAATATTCT GGGGGGCTGG TTTTCGGGGC AGCTAATTGC TCACCAGTAT
TCCGTCAACA GAGCACGGAA AACGGTGATG GGAATTGCGG CTGTGTTAAC GCTGGTCACC
CCGGCCATTT CATGGGTTTC GTCGGTGGAG GTCGCCGTTG GGCTGATGTC GGTTTTCATG
TTTGCGCATG GGTTCTGGAT CACCAATTAT ATCACCTCCA TCTCGGATAT GTTTGGGCAG
AAAGCAACGT CGACAGTCGT TGGGCTGTCC GGAACGGCCG GTGCTGTCTC CAGCTTATTA
CTTAATCCCC TGATGGGCGT GGTCATTCAA CGGTATTCAT ACACCCCACT CTGGGTCGCA
TCGGGATTAC TTTATCCATT GGCGTTTATT CTACTCATCG TGCTCATTCC CAAGATAAAA
GCGCTGGCTA TCAGCACAGA GCAGGCTTCT GTTAATTCTC CTTTGCCCAT ACAAACTCAA
TAA
|
|---|
| Protein sequence | MKRNLRWLIV SLLFVATGLS FLDRQVLSIA IIKIQQEFHI TDVQYGLINT SFLISYAIMF
TLGGWLIDRV GGKLGLAISV GLWSVANSLH AVMTTFSQLL AFRFLLGMGE GGCFPGAAWT
VYRWFDKEER ALANGIAIGG SAIGAVIAPP LTIWLSTNYG WRGGFLIPGL IGIVWVIVWL
LTPWRKENLA AEQPLASSVG KTVPFLDLLK LRPTWVFILI RFLLDPVFYF MMFWIPKYLS
TERNVSFEAI GKLFWIPFLA LGIANILGGW FSGQLIAHQY SVNRARKTVM GIAAVLTLVT
PAISWVSSVE VAVGLMSVFM FAHGFWITNY ITSISDMFGQ KATSTVVGLS GTAGAVSSLL
LNPLMGVVIQ RYSYTPLWVA SGLLYPLAFI LLIVLIPKIK ALAISTEQAS VNSPLPIQTQ
|
|---|
| |