Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4378 |
Symbol | |
ID | 8728138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5308318 |
End bp | 5309271 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | Esterase/lipase-like protein |
Protein accession | YP_003389158 |
Protein GI | 284039228 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.222485 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAT CCATCTGGCG ATTCTTGCTG GTATTGATTG GGCTAACCAG TACCCTCGTT TCCTTTACCG GTAGATTTGT TTTATGGCCA TTGGCACAAC CGGAAGTGGC CGATGAACCA ACTCACATCC GCGATGTTAT TTACGGACAT AAGTTCGGTA CGGCGCTTAC GATGGATGTT CTTAAACCGG CTAAACCCAA TGGCATCGGC GTTATTTTTA CCTTAAGCGG AGGATGGCAC TCGGACATCA GCATGATCGA AAAGCGCCGG AAACATTTTC ATTACTTTAC CGACCGGGGC CAAACGGTAT TCCTGGTTAT TCACAGCTCG GCCCCCAAAT TTCAGGTGAG CGAAGTCCTG CAGGATATTC ACCGGGCTGT TCGATTCATT CGGTTTCACG CGGCCGAGTA TAGCGTTAAT CCGAATCGGC TAGGGATATC GGGTATGAGT TCCGGCGGGC ACCTGTCGTT GTGCCTGGGT ACGGGGGTTG GTCGCCCCCG CTTACCAGAT ACGACGCAGA AAAGCTCGGC TGCTACGCTC GATTCGGTCG ATTTAGTTTC CAGTCGGGTG CAGGCAGTAG CCTGCTTTTT CCCACCCGCC GATCTGGCTA ATTTCGGAAA TCCGGGCCGC TTGTTTGTCG AATGCGATAC TGTTAGGCGG TACTGGCCTC AGTTTGGCGT TGACGGGAAA TCGAGAGCAG AAAAATTGAG GCTGATGGCG TCGTTATCGC CGTTTATGGC TATCGCTTCA GATACCGCGC CAACCCTGAT TTTACATGGT ACGGTCGACC CAATTGTGCC GCTTGAGCAA TCCGAACGGT TTATCGACAA ACTTAAAAAA ACAGGTGTGC CTGCCCAACT GATCGTGCAT CAGGGTGGTG GTCACGGCTG GGACGAAACC TGGGAGTCGG ACCTGGACGT GCTAGCCGGT TGGTTTGAAA AATATCTTCG ATAA
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Protein sequence | MKTSIWRFLL VLIGLTSTLV SFTGRFVLWP LAQPEVADEP THIRDVIYGH KFGTALTMDV LKPAKPNGIG VIFTLSGGWH SDISMIEKRR KHFHYFTDRG QTVFLVIHSS APKFQVSEVL QDIHRAVRFI RFHAAEYSVN PNRLGISGMS SGGHLSLCLG TGVGRPRLPD TTQKSSAATL DSVDLVSSRV QAVACFFPPA DLANFGNPGR LFVECDTVRR YWPQFGVDGK SRAEKLRLMA SLSPFMAIAS DTAPTLILHG TVDPIVPLEQ SERFIDKLKK TGVPAQLIVH QGGGHGWDET WESDLDVLAG WFEKYLR
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