Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4357 |
Symbol | |
ID | 8728117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5285152 |
End bp | 5285934 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | glycosyl transferase, WecB/TagA/CpsF family |
Protein accession | YP_003389137 |
Protein GI | 284039207 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAAG TACTACAAGT TAAGCTGTAC GATGCCGGGC TTTCGTCCGC GGTACAGGAT ATTATTCGGC AGTGCGACCC GGTGCTGCCC AAACAAAACA AATGCATTAG TGCCACGGGC GCACATGGTC TGGTGACGGC CTTCAAAGAG CCCGAATTCA AGGCTACGCT GGATTCGTTT TACTGGAATC TGCCCGACGG GATGCCCGGC GTTTGGGTTG GCAAGATGAA AGGTGCCAAA CAGATGACCC GTTGCTACGG TCCCGACTTC TTCAAATTCG TGATGGAGGA CAGCGCCGAC AAATCGGTGA AGCACTTCTT CTGCGGAGGT CAGGAAGGGG TTGCCGACGA ACTCAAAAAG GCCGTAGGCC GCAAGTTTGG CAACTACCAG ATCAGCGGTA CCTACTGCCC GCCCTTCCGC GAACTATCGG ACAACGAATT TCAGGAACTG GCCGAAACCA TTAACCGCTC GGGGGCCAAC ATCGTCTGGA TTGGGCTGAG TACGCCCAAA CAGGAACGCT TTGCCCGGCG GCTGGCCCAA TGGGTAAACG TCAACTTCAT CGTGACGGTA GGAGCCGCTT TCGACTTCCA CACCGACCGC GTAGCGCAGG CTCCGAGCTG GATGCAGCGA ATGTCGCTGG AATGGCTATT CCGGCTCATG GCCGAACCCA AACGACTCTA CAAGAGATAC TTAGAGATTG TACCGCTCTT TATCCTGCTC AATGTAAAAG AACTTATCTC ACCCGTTAAA CAATCAACTG CTTCGGCAAA TCAACAAGTA TGA
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Protein sequence | MTQVLQVKLY DAGLSSAVQD IIRQCDPVLP KQNKCISATG AHGLVTAFKE PEFKATLDSF YWNLPDGMPG VWVGKMKGAK QMTRCYGPDF FKFVMEDSAD KSVKHFFCGG QEGVADELKK AVGRKFGNYQ ISGTYCPPFR ELSDNEFQEL AETINRSGAN IVWIGLSTPK QERFARRLAQ WVNVNFIVTV GAAFDFHTDR VAQAPSWMQR MSLEWLFRLM AEPKRLYKRY LEIVPLFILL NVKELISPVK QSTASANQQV
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