Gene Slin_4357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4357 
Symbol 
ID8728117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5285152 
End bp5285934 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content54% 
IMG OID 
Productglycosyl transferase, WecB/TagA/CpsF family 
Protein accessionYP_003389137 
Protein GI284039207 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAG TACTACAAGT TAAGCTGTAC GATGCCGGGC TTTCGTCCGC GGTACAGGAT 
ATTATTCGGC AGTGCGACCC GGTGCTGCCC AAACAAAACA AATGCATTAG TGCCACGGGC
GCACATGGTC TGGTGACGGC CTTCAAAGAG CCCGAATTCA AGGCTACGCT GGATTCGTTT
TACTGGAATC TGCCCGACGG GATGCCCGGC GTTTGGGTTG GCAAGATGAA AGGTGCCAAA
CAGATGACCC GTTGCTACGG TCCCGACTTC TTCAAATTCG TGATGGAGGA CAGCGCCGAC
AAATCGGTGA AGCACTTCTT CTGCGGAGGT CAGGAAGGGG TTGCCGACGA ACTCAAAAAG
GCCGTAGGCC GCAAGTTTGG CAACTACCAG ATCAGCGGTA CCTACTGCCC GCCCTTCCGC
GAACTATCGG ACAACGAATT TCAGGAACTG GCCGAAACCA TTAACCGCTC GGGGGCCAAC
ATCGTCTGGA TTGGGCTGAG TACGCCCAAA CAGGAACGCT TTGCCCGGCG GCTGGCCCAA
TGGGTAAACG TCAACTTCAT CGTGACGGTA GGAGCCGCTT TCGACTTCCA CACCGACCGC
GTAGCGCAGG CTCCGAGCTG GATGCAGCGA ATGTCGCTGG AATGGCTATT CCGGCTCATG
GCCGAACCCA AACGACTCTA CAAGAGATAC TTAGAGATTG TACCGCTCTT TATCCTGCTC
AATGTAAAAG AACTTATCTC ACCCGTTAAA CAATCAACTG CTTCGGCAAA TCAACAAGTA
TGA
 
Protein sequence
MTQVLQVKLY DAGLSSAVQD IIRQCDPVLP KQNKCISATG AHGLVTAFKE PEFKATLDSF 
YWNLPDGMPG VWVGKMKGAK QMTRCYGPDF FKFVMEDSAD KSVKHFFCGG QEGVADELKK
AVGRKFGNYQ ISGTYCPPFR ELSDNEFQEL AETINRSGAN IVWIGLSTPK QERFARRLAQ
WVNVNFIVTV GAAFDFHTDR VAQAPSWMQR MSLEWLFRLM AEPKRLYKRY LEIVPLFILL
NVKELISPVK QSTASANQQV