| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4321 |
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| Symbol | |
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| ID | 8728081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5233675 |
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| End bp | 5237742 |
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| Gene Length | 4068 bp |
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| Protein Length | 1355 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | histidine kinase |
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| Protein accession | YP_003389102 |
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| Protein GI | 284039172 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.295286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACAG GCATGCGTAC GTTTATCTTG TTGTTGCTGC TGCCTTTCTC TTACGCGATT
GGCCAAAGCC GAATCCGAAC GCACGATGTC GTTAGCACAG ACCTGATTTT TGAAAAGTAC
AGCAGCCGAA ACGGCCTTCC CGACGACCGA AGTCGGGCGC TTTTTCAGGA TAGCAAAGGG
TTTATGTGGG TAGGGACCAT GAATGGACTC GCCCGGTTTG ACGGCTATTC ATTTACCCCT
TACGTACATA AAGACGGCGT CAACAGCCTG GTTGGCAACT GGATAAAAGT TATTTGCGAA
GCGGCCGATC ATGCCATCTG GATTGGTACC AAGGAGGGCC TTAGCCGGTT CGATCCGCGC
CTGAATACCT TTACAAACTA CCAGAGCGAC CCCGGTAAAA CAAACTCCCT GCTCTGTAAT
CAAATCAATA GTCTGGTATT TGACAGCCGG GGTAAACTAT GGATTGGTAC ACCCAACGGG
CTGACCGTTT TTGACCCGGT TACTCAGACG TTCAGGCGCT TCGCCACTCA CCCCTTAAAC
ACCCGCATCA CCAAACTGCT CCGCGCCGAA GGGGACTTTA TGTGGATGGC TACTCAGGAA
GGGCCCGTGA AATACAATGT CCGGACGAAC ACCTTTAAAC GCTTTCCTCT GGCGGTACGG
GCCAATCCAT TCGGCGACAG TTTTTCTTCC ATGCTTGAAG TAAACCATGA TCTGTACATC
GGCACTTTTA TGGATGGGCT GTTCCGGCTG CCATTCCGGG CCAAAACCGG CGATTATGGC
CCCATAGAAC CCATGAAATC GTTCGTGGCC GGTATCAAAG AAAACCAGGG CAATCAGATT
TACGACCTCT GTCAGTCGAA TAGCGGCACA ATCTGGCTGG CTACAAACAA CGGCGTTGCC
CGGCTTGAAC ACATGGATTC CGGGCGTCCG CAGCTCCACT ATTTTCGGCA CAACCTCACC
AATGGCCAGA GTCTGAGTAA TAACACAGTC TATAAAATTC TGATCGACAG AACCAATGTA
CTCTGGTGCG GTACGGAAGA CGGGCTCAAT AAAACCGACC TGGAACTACT ACCCTTTACA
TACTATACGT TTTTTAATCA ACATGCTCAG GATCAGGTCA GGAGTATTTA TTCGGCTACT
GGCAAAACGC TTTGGTTTGG TACCGTTAAA TCAGGGTTAT ATGCCTACGA TACGCAAACG
AACAATACAT ACCACATCAA ATTTGGCTCA ACCGAATCTT TTTTAAATGC CCATCGGGTG
CTTTACCCGG CTGCCGACGG AGGCTTGTGG ATCGGTACAT TGGGTGGAGC TATGCATCTG
CCGACGAACA ACCCGACTCG CCCCGTTATG TACCTGAACG GGCTGGCCAC CTACGCTTTC
CTGACCGACA ACCGGAAGAA TGTATGGATT GGCACCTTCG ATGGTTTGTA TCGCATTAGC
CCGAATGGTA AAGCCAGCCG GATGTTGACC CAGCCGAAAG ACCGCGATTT CATTCGCGCA
CTGTATCAGG ACCATACCGG TAAAATCTGG GTAGGGTACG AAAGCAGCGG GCTGTATTGC
TTCGACCCCC AAACCGGCTT TTCTCAGCGG GTGATCCACT CCGGGCGGGG GCAAATACTG
CTTGGTAATA CGATTTTTAC GATACTGGAA TACCCAAAAA ATGTGCTCTG GGTCGGTACC
GAAGGCGGCC TTAACCGAAT TACCCTGGGC CCGGATCAGT CGTATACCAT CAAGTCCTAC
GAAGAGAACG ATGGGCTGCC AGCACTGGCG GTCAACAGTT TACTGGCCGA CAAACAGGGG
AATTTATGGA TCGGCACGAG CAAAGGGCTG GCCCGTTTCG ATACGCGGCA CGAGCAGTTC
CAGATCTACC TCCGTGGCAG TAGTTTCAGC TATAACGGCT GTAGTCAGTT GACCAGCGAT
AAGCTGCTTT TCGGCACTTC CGACGGGTTT GTCATCTTCG ATCCAAAGGC TATTCACCCG
GTGTCGAGCC TGCCCGCCGT AGCGTTGACG GAGTTGAAAA TCCTGAACAA GCCGGTGTCG
ATTGGGCAGG TCATTAATGA AGACACCCTA CTAAGGCAGG GTATTGAGCA TACAACGGCT
ATTACGCTCA ATCACCTGAA CAATGTATTT TCGGTTGGTT TCAGCGCCCT GCACTTTTCT
AACCCGGCCG CCAATGCCTA TGCGTTCAAA CTGGAAGGGT TCGACAAAGA CTGGATACAT
GCCGATGCCC GAAACCGGAC GGCTACGTAC ACCAACCTGG ACCCCGGCTC ATACCGGCTT
CTGGTCAAGT CTGCCAATTA TTTGGGGCAG TGGAACCCCA GACCCGTTGT GCTGGCTATT
ACCGTTTTAC CGGCGCCCTG GAAAAGTAAA CCGGCAATAG CGGGCTATCT CCTCGTCACG
AGTCTCGTAC TGGTGGGTGT TGTGCGTCAT TTGCTAGCTC AGTCCCGCCA GCGGCAGCAA
CTGATGTTCG CGCAGCGGGA AAAGGAACAA CAGGATCGTT TACACGAACT AAAACTTCAA
TTCTTTACTG ATGTATCGCA TGAGTTTCGT ACGCCCCTTT CCCTGATCAG CGGCCCCGTT
GAAGAGTTAA TACTGGCAAA AGAGGTGCAG GGGGGCGTTC GGCAGAAGAT CGAATACGTA
CAGCGCAACA CCCGGAAACT GCTGCAGTTG ATCGATGAAT TGATGACGTT TCAAAAAATG
GAGCAGGGAA AGCTTCGCCT GCAACTGGAG CGAATCGACC TGAACAGCTT CGTCCGGGAC
ATCGCCGATA ATTTCACCGG ACTGGCCGAA CAAAAGGGCA TAGACTTCCG GCTGGCGATG
GAACCGCTGC CGCTTTACGT ACCTGTTGAT GCCAATAAGC TGGATAAAGT GTTAAGTAAT
CTGCTTATCA ATGCCTTCAA GTTCACCCCT TCGGGCGGCT GTGTGCAGTT GACGCTGGCT
TTGTGTCAGA ACGGGGAAGC TACCGGCGAC TGGGTACGAA TCATAGTGGA GGACAACGGG
AAAGGCATTT CCAGAGAAGA ACAGGCTCAT TTATTCGAAC GCTTTTTCCA GTCCGAGACC
ATCAAGGGAG GAACGGGTGT CGGGCTATCG CTGGCAAAAA GTCTGGTTGA ACTACACAAA
GGGGAGATTT CGGTACAGAG CGACCCCGGC GAATTTACCC GCTTTACGGT GTTGCTGCCC
GTGCTGCCCG CAACGGACAT CGCAACCATC CCGAGTGAAC TGGTTTCACT ACCAACGTTG
CCGGTTCATG AACACGCTCC TCAGGTGACC TTATCGACAA CCGATGGGGC CGCAAAAGCC
AGCTTACTGC TGGTCGATGA TAATGTTGAA GTACTAAATT ATCTCGAACA GACTTTCCAG
GCGCAGTACA CCATCCGAAA AGCCGAGAAT GGGCAGGAAG CCCTTCGACT GATTCAGCAA
CACGAGCCGG ACGTGATCAT TTGCGACGTT GCCATGCCCG TTATGGATGG GGTAACGTTC
TGTCGGCGGC TTAAAACGGA TGTGGTTACC AGCCATATTC CCCTGGTGCT GCTTACCGCC
CGGACGGCGG TCGAAAGCGA ACTGATCGGG CTCAACGCCG GTGCCGATGA TTACATCGCC
AAACCTTTTC ACCCCCAGCT GCTGGCCGTA CGCATCGAAA AACTGATCGA AAACCGACGG
CTGCTGATTC AGAAATACCA GGCCAGCGGG GTTGTTATTC CGGAAAACAT CACCAGCAAC
CCACTGGACC AGGCCCTTCT GCAACGGATT ATAGACACCA TAATGGTCAA TCTGGACAAC
GACGAGTTTG GGGTAGAAGA GCTGGGCGAA CGGGTCAATA TGAGCCGCAG CAACCTGTTT
CGTAAAGTGA AGGCACTTAC GGGGCAAACG CCCATCGAGT TCATTTATGA CCTTCGGCTG
AAACACGCTC TGTCACTGCT CCTTGAGCGT AAGCTGAACA TCTCCGAAAT TACCAGCGCC
GTTGGCTTCA AAACCCGCTC TTCTTTCACC AAATCGTTCC GCAAGCAGTT TGGCAAAGCC
CCTACCGACT ACCTGAACGA TGTGCTGGCC CGCCAGCGGC AGGCCTAG
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| Protein sequence | MDTGMRTFIL LLLLPFSYAI GQSRIRTHDV VSTDLIFEKY SSRNGLPDDR SRALFQDSKG
FMWVGTMNGL ARFDGYSFTP YVHKDGVNSL VGNWIKVICE AADHAIWIGT KEGLSRFDPR
LNTFTNYQSD PGKTNSLLCN QINSLVFDSR GKLWIGTPNG LTVFDPVTQT FRRFATHPLN
TRITKLLRAE GDFMWMATQE GPVKYNVRTN TFKRFPLAVR ANPFGDSFSS MLEVNHDLYI
GTFMDGLFRL PFRAKTGDYG PIEPMKSFVA GIKENQGNQI YDLCQSNSGT IWLATNNGVA
RLEHMDSGRP QLHYFRHNLT NGQSLSNNTV YKILIDRTNV LWCGTEDGLN KTDLELLPFT
YYTFFNQHAQ DQVRSIYSAT GKTLWFGTVK SGLYAYDTQT NNTYHIKFGS TESFLNAHRV
LYPAADGGLW IGTLGGAMHL PTNNPTRPVM YLNGLATYAF LTDNRKNVWI GTFDGLYRIS
PNGKASRMLT QPKDRDFIRA LYQDHTGKIW VGYESSGLYC FDPQTGFSQR VIHSGRGQIL
LGNTIFTILE YPKNVLWVGT EGGLNRITLG PDQSYTIKSY EENDGLPALA VNSLLADKQG
NLWIGTSKGL ARFDTRHEQF QIYLRGSSFS YNGCSQLTSD KLLFGTSDGF VIFDPKAIHP
VSSLPAVALT ELKILNKPVS IGQVINEDTL LRQGIEHTTA ITLNHLNNVF SVGFSALHFS
NPAANAYAFK LEGFDKDWIH ADARNRTATY TNLDPGSYRL LVKSANYLGQ WNPRPVVLAI
TVLPAPWKSK PAIAGYLLVT SLVLVGVVRH LLAQSRQRQQ LMFAQREKEQ QDRLHELKLQ
FFTDVSHEFR TPLSLISGPV EELILAKEVQ GGVRQKIEYV QRNTRKLLQL IDELMTFQKM
EQGKLRLQLE RIDLNSFVRD IADNFTGLAE QKGIDFRLAM EPLPLYVPVD ANKLDKVLSN
LLINAFKFTP SGGCVQLTLA LCQNGEATGD WVRIIVEDNG KGISREEQAH LFERFFQSET
IKGGTGVGLS LAKSLVELHK GEISVQSDPG EFTRFTVLLP VLPATDIATI PSELVSLPTL
PVHEHAPQVT LSTTDGAAKA SLLLVDDNVE VLNYLEQTFQ AQYTIRKAEN GQEALRLIQQ
HEPDVIICDV AMPVMDGVTF CRRLKTDVVT SHIPLVLLTA RTAVESELIG LNAGADDYIA
KPFHPQLLAV RIEKLIENRR LLIQKYQASG VVIPENITSN PLDQALLQRI IDTIMVNLDN
DEFGVEELGE RVNMSRSNLF RKVKALTGQT PIEFIYDLRL KHALSLLLER KLNISEITSA
VGFKTRSSFT KSFRKQFGKA PTDYLNDVLA RQRQA
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