Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4263 |
Symbol | |
ID | 8728022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5146151 |
End bp | 5147323 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | UDP-4-keto-6-deoxy-N-acetylglucosamine4- aminotra nsferase |
Protein accession | YP_003389046 |
Protein GI | 284039116 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.534906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATAA TCCCCTACGG TCGGCAGCAC ATTACGGACG AGGATATTGC CGCCGTTGCC GATGTGCTGC GTGGCCCCTT TTTAACGCAG GGTCCGCATA TCGGTGCGTT TGAAACCGCT TTTGCCCGCT ATATCGGCTG CAACTACGCT GTGGCGGTTG CCAACGGTAC GGCCGCGCTT CACCTGTGTT GCATGGCCCT CGGCGTAACC GAAGGAACCC GCGTTATCAC TACGCCCATT ACCTTCTCGG CTTCGGCCAA CTGCGTTCGC TATTGCGGGG GCGAAGTCCA TTTTGCCGAT GTCGATCCCA AGACGGCCCT GCTGGACATT AATGCCGTAC GGACGCTTAT CGAACAACAC CCCAAAGGCT ATTTCTCGGG CATTATTCCA GTCGATTTTG CGGGGTACCC GGTCGATTTG GCCGCATTCC GCGAACTGGC CGATGAACAT GGGCTCTGGA TTCTGGAAGA TAGCTGCCAC TCGCCGGGCG GTTCGTTTAC CGATAGCCAG GGCGTCGATC ACCGCTGTGG AGACGGCTCA CTGGCCGATC TCGCCATTTT TAGTTTTCAC CCCGTCAAGC ACATTGCGGC CGGTGAGGGC GGCATGATTA CGACCAACGA CGAAGCACTC TATAAACACC TGATGCGGCT CCGGACGCAC GGCATCACCA ACAAACCGAA CGAGTTTACC GAACCGTATT CCGGCGAACC CGAACGCGGG GGCTGGTACA TGGAGTTGCA GGAACTAGGC TATAATTACC GCCTGACCGA CATGCAGGCG GCCCTCGGCA ATAGCCAGTT GGCCCGCGCC GAAGCCATGC TGGCCCGTCG GCAGGAAATT GCAAAACGAT ACGACGATGC CTTTGCCGGA ACACCGGTGG TCACCATCGT TCCGCCCGCC AGCGTCAGCC ATGCTTATCA CCTGTACGTC GTTCAGGTGG ATGACCGAAA GGGTCTGTAC GACTTTCTGC GAACCCGCAA CATCATGGCG CAGGTGCATT ACATACCGGT GCATCTGATG CCGTACTACC GGCAGTTCGG CTGGAAACCG GGGGACTTCC CTAATGCCGA ACGGTACTAC GCCCGCTGCC TGAGTCTGCC CATGTTCCCA ACGCTGACGG ATGATGAACA GGTGTATGTG ATCGACTCGG TGAAGGAATT TACAGGCGCA TGA
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Protein sequence | MSIIPYGRQH ITDEDIAAVA DVLRGPFLTQ GPHIGAFETA FARYIGCNYA VAVANGTAAL HLCCMALGVT EGTRVITTPI TFSASANCVR YCGGEVHFAD VDPKTALLDI NAVRTLIEQH PKGYFSGIIP VDFAGYPVDL AAFRELADEH GLWILEDSCH SPGGSFTDSQ GVDHRCGDGS LADLAIFSFH PVKHIAAGEG GMITTNDEAL YKHLMRLRTH GITNKPNEFT EPYSGEPERG GWYMELQELG YNYRLTDMQA ALGNSQLARA EAMLARRQEI AKRYDDAFAG TPVVTIVPPA SVSHAYHLYV VQVDDRKGLY DFLRTRNIMA QVHYIPVHLM PYYRQFGWKP GDFPNAERYY ARCLSLPMFP TLTDDEQVYV IDSVKEFTGA
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